9MSC image
Deposition Date 2025-01-09
Release Date 2026-01-14
Last Version Date 2026-08-26
Entry Detail
PDB ID:
9MSC
Title:
Structure of Hepatitis C Virus Envelope Glycoprotein HCV-1 E2ecto from genotype 1a bound to neutralizing antibody RM5-16
Biological Source:
Source Organism(s):
Expression System(s):
Method Details:
Experimental Method:
Resolution:
3.39 Å
R-Value Free:
0.31
R-Value Work:
0.27
R-Value Observed:
0.28
Space Group:
P 32 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:HEPC46 fab HC
Chain IDs:D (auth: A)
Chain Length:223
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:HEPC46 fab LC
Chain IDs:C (auth: B)
Chain Length:217
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Envelope glycoprotein E2
Chain IDs:E
Chain Length:262
Number of Molecules:1
Biological Source:Hepatitis C virus (isolate 1)
Polymer Type:polypeptide(L)
Molecule:RM5-16 fan HC
Chain IDs:B (auth: H)
Chain Length:224
Number of Molecules:1
Biological Source:Macaca mulatta
Polymer Type:polypeptide(L)
Molecule:RM5-16 fab LC
Chain IDs:A (auth: L)
Chain Length:216
Number of Molecules:1
Biological Source:Macaca mulatta
Primary Citation
Structural and genetic signatures of two classes of HCV E2 neutralizing face antibodies from non-human primates immunized with a recombinant E1E2.
Npj Vaccines 11 ? ? (2026)
PMID: 42009696 DOI: 10.1038/s41541-026-01449-1

Abstact

Hepatitis C continues to be a significant public health problem despite advancements in antiviral therapeutics. To eliminate this disease, an effective vaccine against new infections and re-infections is needed. However, to date only one Hepatitis C virus (HCV) envelope protein (E1E2) immunogen, developed by Chiron Inc., has been tested in a Phase I clinical trial (ClinicalTrials.gov identifier NCT00500747). To establish a benchmark for elicitation of broadly neutralizing antibodies (bnAbs) by E1E2, we previously immunized non-human primates (NHPs) with this immunogen and isolated monoclonal nAbs that exhibit neutralization potency comparable to human nAbs. Here we show that NHP nAbs, encoded by germline genes IGHV1-138*01 and IGHV4-NL_5*01 (homologs of human IGHV1-69*10 and IGHV4-59*12, respectively), recognize a relatively conserved E2 region (neutralizing face) proximal to antigenic region 3 (AR3). These NHP AR3-targeting nAbs share highly similar binding modes to human AR3-targeting nAbs, suggesting a similarity in human and NHP immune responses to the same HCV immunogen.

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Primary Citation of related structures
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