9LQQ image
Deposition Date 2025-01-28
Release Date 2026-08-05
Last Version Date 2026-08-05
Entry Detail
PDB ID:
9LQQ
Keywords:
DNA BINDING PROTEIN/DNA
Title:
Structure of transposase-activated RAG target capture complex with X-form U-shaped target DNA (TCC-UDX)
Biological Source:
Source Organism(s):
Mus musculus (Taxon ID: 10090)
synthetic construct (Taxon ID: 32630)
Expression System(s):
Homo sapiens
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.60 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
9LQQ validation report missing
Macromolecular Entities
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:V(D)J recombination-activatin
Gene (Uniprot):Rag1
Mutagens:E962N
Chain IDs:C (auth: A), E (auth: C)
Chain Length:750
Number of Molecules:2
Biological Source:Mus musculus
UniProt ID:P15919 Pfam ID:PF00097, PF10426, PF12940, PF26024, PF26025, PF26100, PF26101, PF26104, PF26105 EC:3.1.-.-,2.3.2.27
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Early growth response protein
Gene (Uniprot):Egr1, Rag2
Chain IDs:D (auth: B), F (auth: D)
Chain Length:457
Number of Molecules:2
Biological Source:Mus musculus
UniProt ID:P08046,P21784 Pfam ID:PF00096, PF03089
Polymer Type:polydeoxyribonucleotide
Molecule:Target DNA bottom strand
Chain IDs:A (auth: I)
Chain Length:59
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Molecule:Target DNA top strand
Chain IDs:B (auth: J)
Chain Length:59
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Molecule:12RSS top strand
Chain IDs:G (auth: L)
Chain Length:34
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Molecule:23RSS top strand
Chain IDs:I (auth: M)
Chain Length:45
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Molecule:23RSS bottom strand
Chain IDs:J (auth: x)
Chain Length:45
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Molecule:12RSS bottom strand
Chain IDs:H (auth: y)
Chain Length:34
Number of Molecules:1
Biological Source:synthetic construct
Ligand Molecules
MG
ZN
Primary Citation
Structural basis and dynamics of target capture and integration during cut-and-paste transposition
To Be Published ? ? ? (?)
Primary Citation of related structures
9LQQ
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