9L9K image
Deposition Date 2024-12-30
Release Date 2026-07-08
Last Version Date 2026-07-08
Entry Detail
PDB ID:
9L9K
Keywords:
RIBOSOME
Title:
State E of archaeal pre-50S ribosome
Biological Source:
Source Organism(s):
Haloferax mediterranei ATCC 33500 (Taxon ID: 523841)
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
2.36 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
9L9K validation report missing
Macromolecular Entities
Polymer Type:polyribonucleotide
Molecule:23S RNA
Chain IDs:A (auth: 0)
Chain Length:2916
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
Polymer Type:polyribonucleotide
Molecule:5S RNA
Chain IDs:B (auth: 1)
Chain Length:122
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl39E
Chain IDs:DA (auth: A)
Chain Length:50
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R0V8
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl7AE
Chain IDs:D (auth: E)
Chain Length:120
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R865
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplP
Chain IDs:E (auth: F)
Chain Length:176
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R1S5
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl15A
Chain IDs:F (auth: G)
Chain Length:196
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R1Z8
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl18A
Chain IDs:G (auth: H)
Chain Length:116
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R8A5
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl18
Chain IDs:H (auth: I)
Chain Length:184
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:P50561
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl19A
Chain IDs:I (auth: J)
Chain Length:151
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R7P1
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl21R
Chain IDs:J (auth: K)
Chain Length:96
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R877
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl22P
Chain IDs:K (auth: L)
Chain Length:153
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R7Q4
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl24A
Chain IDs:L (auth: M)
Chain Length:67
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R867
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl24P
Chain IDs:M (auth: N)
Chain Length:118
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R7P8
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl30P
Chain IDs:N (auth: O)
Chain Length:154
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R7N8
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl31R
Chain IDs:O (auth: P)
Chain Length:92
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R0V9
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl32
Chain IDs:P (auth: Q)
Chain Length:234
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R7P2
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl37AR
Chain IDs:Q (auth: R)
Chain Length:89
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R290
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl37E
Chain IDs:R (auth: S)
Chain Length:58
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R849
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl44E
Chain IDs:S (auth: T)
Chain Length:93
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R2C4
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl2P
Chain IDs:T (auth: U)
Chain Length:241
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R7Q6
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplC
Chain IDs:U (auth: V)
Chain Length:338
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R7Q9
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl4LP
Chain IDs:V (auth: W)
Chain Length:248
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R7Q8
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl5
Chain IDs:W (auth: X)
Chain Length:172
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:P50557
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplF
Chain IDs:X (auth: Y)
Chain Length:178
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R7P3
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl13P
Chain IDs:Y (auth: b)
Chain Length:145
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R8A4
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplW
Chain IDs:Z (auth: c)
Chain Length:83
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R7Q7
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpmC
Chain IDs:AA (auth: d)
Chain Length:70
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R7Q2
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplX
Chain IDs:CA (auth: e)
Chain Length:58
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R0W1
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rpl14P
Chain IDs:BA (auth: f)
Chain Length:132
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R7P9
Structures with similar UniProt ID
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):rplO
Chain IDs:C (auth: i)
Chain Length:168
Number of Molecules:1
Biological Source:Haloferax mediterranei ATCC 33500
UniProt ID:I3R7N7
Ligand Molecules
BGC
MG
ZN
Primary Citation
State E of archaeal pre-50S ribosome
To Be Published ? ? ? (?)
Primary Citation of related structures
9L9K
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