9FPP image
Deposition Date 2024-06-13
Release Date 2025-06-25
Last Version Date 2026-04-29
Entry Detail
PDB ID:
9FPP
Keywords:
Title:
FGD2 (Rv0132c) from Mycobacterium tuberculosis with cofactor F420 crystallised with Anderson-Evans polyoxotungstate
Biological Source:
Source Organism(s):
Expression System(s):
Method Details:
Experimental Method:
Resolution:
2.35 Å
R-Value Free:
0.25
R-Value Work:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:F420-dependent hydroxymycolic
Gene (Uniprot):fgd2
Chain IDs:A, B, C (auth: E), D (auth: F)
Chain Length:332
Number of Molecules:4
Biological Source:Mycobacterium tuberculosis H37Rv
Primary Citation
The Mycobacterium tuberculosis Rv0132c Gene Product Mtb-FGD2 Can Act as an F 420 -Dependent Glucose Dehydrogenase.
Proteins ? ? ? (2026)
PMID: 42012189 DOI: 10.1002/prot.70139

Abstact

The role of the cell envelope-associated Rv0132c/FGD2 from Mycobacterium tuberculosis has long been a subject of debate. Importantly, FGD2 is found only in pathogenic mycobacteria, making it a potential drug target. While some suggest it functions as a glucose-6-phosphate dehydrogenase, others propose it acts instead as an F(420)-dependent hydroxy-mycolic acid dehydrogenase-an activity linked to cell-wall remodeling and inhibition by the anti-tubercular drug pretomanid. Yet, direct evidence for either activity has been lacking. Here, we heterologously express and purify active Mtb-FGD2, and demonstrate that the enzyme binds the F(420) cofactor with nanomolar affinity. Crystal structures for both the apo-form and the F(420) complex reveal that the Mtb-FGD2 active site architecture is consistent with sugar substrates but notably lacks a phosphate-binding pocket. Biochemical assays confirm that Mtb-FGD2 functions efficiently as an F(420)-dependent glucose dehydrogenase in vitro. Computational docking combined with molecular dynamics simulations further supports the formation of a catalytically plausible beta-D-glucose:F(420) ternary complex. When coupled to other F(420)-dependent enzymes, Mtb-FGD2 readily supports glucose-driven F(420).H(2)-dependent oxidoreductase activity. Our data thus suggest that the Mtb-FGD2 provides reduced F(420).H(2) in a glucose-dependent manner to support mycobacterial F(420).H(2)-dependent oxidoreductases in the cell envelope.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
Feedback Form
Name
Email
Institute
Feedback