9FDO image
Deposition Date 2024-05-17
Release Date 2025-05-28
Last Version Date 2026-09-09
Entry Detail
PDB ID:
9FDO
Keywords:
Title:
Structure of synthetic C-terminal biotinylated schistosomin with the point mutation D88E from Biomphalaria glabrata in C2 space group
Biological Source:
Source Organism(s):
Method Details:
Experimental Method:
Resolution:
2.06 Å
R-Value Free:
0.27
R-Value Work:
0.22
R-Value Observed:
0.23
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Schistosomin
Gene (Uniprot):106077549
Mutagens:D88E
Chain IDs:A, B
Chain Length:80
Number of Molecules:2
Biological Source:Biomphalaria glabrata
Primary Citation
Total synthesis and structural characterization of a novel protein scaffold from the snail Biomphalaria glabrata.
Protein Sci. 35 e70745 e70745 (2026)
PMID: 42554520 DOI: 10.1002/pro.70745

Abstact

Disulfide-rich miniproteins constitute compact and highly stable scaffolds of growing interest for molecular and structural engineering. Schistosomins are ~80-residue proteins conserved across gastropods that form a long-standing orphan family whose structure and biological roles have remained unknown. Here, we report the total chemical synthesis and structural characterization of a schistosomin isoform from Biomphalaria glabrata, a medically relevant intermediate host of the parasite Schistosoma mansoni. Using state-of-the-art solid-phase peptide synthesis, chemoselective peptide ligation, and controlled oxidative folding, we obtained homogeneous, well-folded schistosomin suitable for biophysical and structural studies. High-resolution X-ray crystallography reveals a previously undescribed disulfide-rich fold defining a new class of miniprotein scaffold. Nano differential scanning fluorimetry and circular dichroism experiments demonstrate the remarkable thermal stability of this scaffold. Complementary in silico analyses suggest that the two naturally occurring isoforms, which differ by a single residue, exhibit highly similar structural and dynamic properties. Finally, transcript and protein analyses across snail tissues provide the first spatial expression map of schistosomin in a medically relevant mollusk. Together, this work establishes schistosomin as a novel and robust miniprotein scaffold and provides a structural and biological framework for exploring its function and potential applications.

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