9D2Y image
Deposition Date 2024-08-09
Release Date 2025-08-13
Last Version Date 2025-08-13
Entry Detail
PDB ID:
9D2Y
Title:
Cryo-EM structure of mycocerosic acid synthase with double KS-ACP crosslinking using C16 alpha-bromoamide. Complex A
Biological Source:
Source Organism(s):
Expression System(s):
Method Details:
Experimental Method:
Resolution:
3.87 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Multifunctional mycocerosic a
Gene (Uniprot):mas
Chain IDs:A, B
Chain Length:2124
Number of Molecules:2
Biological Source:Mycobacterium tuberculosis
Ligand Molecules
Primary Citation
Visualizing acyl carrier protein interactions within a crosslinked type I polyketide synthase.
Nat Commun 16 7798 7798 (2025)
PMID: 40841798 DOI: 10.1038/s41467-025-63024-x

Abstact

Using a combination of dual covalent crosslinking and cryo-EM analyses, we elucidate the structure of mycocerosic acid synthase from Mycobacterium tuberculosis trapped in two distinct catalytic states during its iterative cycle. These structures reveal domain architecture of the acyl carrier protein mediating condensation and dehydration through dual site-selective crosslinking of the acyl carrier protein with the ketosynthase and dehydratase domains. Map density was sufficient to visualize full domain architecture with active site-bound probes and elucidate key interactions of four distinct crosslinked species. Here, iterative vectorial polyketide biosynthesis arises through an overall twisting and tilting architecture, enabling positioning and entry of the cognate substrate at each enzymatic domain. These structures present valuable details for future therapeutic design against mycocerosic acid biosynthesis in M. tuberculosis.

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Chemical

Disease

Primary Citation of related structures
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