9B8C image
Deposition Date 2024-03-29
Release Date 2025-07-30
Last Version Date 2025-07-30
Entry Detail
PDB ID:
9B8C
Title:
RM018 Fab in complex with Apex GT 6.2 trimer and RM20A3 Fab
Biological Source:
Source Organism(s):
Expression System(s):
Method Details:
Experimental Method:
Resolution:
3.30 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Envelope glycoprotein gp120
Gene (Uniprot):env
Chain IDs:A, C, D
Chain Length:467
Number of Molecules:3
Biological Source:Human immunodeficiency virus 1
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Transmembrane protein gp41
Gene (Uniprot):env
Chain IDs:B, E, F
Chain Length:153
Number of Molecules:3
Biological Source:Human immunodeficiency virus 1
Protein Blast
Polymer Type:polypeptide(L)
Molecule:RM20A3 fragment antigen bindi
Chain IDs:G, J, N
Chain Length:128
Number of Molecules:3
Biological Source:Macaca mulatta
Protein Blast
Polymer Type:polypeptide(L)
Molecule:RM018 fragment antigen bindin
Chain IDs:H
Chain Length:134
Number of Molecules:1
Biological Source:Macaca mulatta
Protein Blast
Polymer Type:polypeptide(L)
Molecule:RM20A3 fragment antigen bindi
Chain IDs:I, K, M
Chain Length:125
Number of Molecules:3
Biological Source:Macaca mulatta
Protein Blast
Polymer Type:polypeptide(L)
Molecule:RM018 fragment antigen bindin
Chain IDs:L
Chain Length:216
Number of Molecules:1
Biological Source:Macaca mulatta
Ligand Molecules
Primary Citation

Abstact

An effective prophylactic HIV vaccine will likely need to induce broadly neutralizing antibodies (bnAbs). bnAbs to the Apex region of the HIV envelope glycoprotein (Env) are promising targets for vaccination because of their relatively low somatic hypermutation compared with other bnAbs. Most Apex bnAbs engage Env using an exceptionally long heavy-chain complementarity-determining region 3 (HCDR3) containing specific binding motifs, which reduces bnAb precursor frequency and makes priming of rare bnAb precursors a likely limiting step in the path to Apex bnAb induction. We found that adjuvanted protein or mRNA lipid nanoparticle (LNP) immunization of rhesus macaques with ApexGT6, an Env trimer engineered to bind Apex bnAb precursors, consistently induced Apex bnAb-related precursors with long HCDR3s bearing bnAb-like sequence motifs. Cryo-electron microscopy revealed that elicited Apex bnAb-related HCDR3s had structures combining elements of several prototype Apex bnAbs. These results achieve a critical HIV vaccine development milestone in outbred primates.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
Feedback Form
Name
Email
Institute
Feedback