8SPA image
Deposition Date 2023-05-02
Release Date 2024-05-08
Last Version Date 2026-03-11
Entry Detail
PDB ID:
8SPA
Keywords:
Title:
Structural insights into cellular control of the human CPEB3 prion, functionally regulated by a labile-amyloid-forming segment
Biological Source:
Source Organism(s):
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
3.00 Å
Aggregation State:
FILAMENT
Reconstruction Method:
HELICAL
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Cytoplasmic polyadenylation e
Gene (Uniprot):CPEB3
Chain IDs:A, B, C, D, E
Chain Length:49
Number of Molecules:5
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structural insights into functional regulation of the human CPEB3 prion by an amyloid-forming segment.
Structure 33 1314 1324.e5 (2025)
PMID: 40480223 DOI: 10.1016/j.str.2025.05.007

Abstact

The cytoplasmic polyadenylation-element-binding-protein-3 (CPEB3) is a functional prion thought to modulate protein synthesis and enable consolidation of long-term memory in neurons. We report a cryoelectron microscopy (cryo-EM) structure of amyloid fibrils grown in vitro from the first prion-like domain of human CPEB3 (hCPEB3), revealing their ordered 49-residue core, spanning L103 to F151. CPEB3 lacking that segment coalesces into abnormal puncta in cells compared to wild-type CPEB3, localizes away from dormant p-bodies and toward stress granules, and lacks the ability to influence protein synthesis in neurons. Fluorescence-guided cryo-focused ion beam (cryo-FIB) milling and cryo-electron tomography (cryo-ET) applied to neuronal cells expressing CPEB3 reveal CPEB3-GFP signal from lamellae enriched in multivesicular bodies (MVBs), cavernous multilamellar compartments, and bundled filaments, suggesting a state of induced cellular stress. Accordingly, cells expressing wild-type CPEB3 are less viable than those expressing CPEB3 without its amyloid core, suggesting human CPEB3 regulation may be required to overcome the liability associated with its self-assembly in cells.

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Primary Citation of related structures
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