8RS7 image
Deposition Date 2024-01-24
Release Date 2025-11-05
Last Version Date 2026-06-17
Entry Detail
PDB ID:
8RS7
Keywords:
Title:
Crystal structure of Zika Virus NS2B-NS3 protease in complex with an allosteric inhibitor
Biological Source:
Source Organism(s):
Zika virus (Taxon ID: 64320)
Expression System(s):
Method Details:
Experimental Method:
Resolution:
3.18 Å
R-Value Free:
0.33
R-Value Work:
0.28
R-Value Observed:
0.28
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Genome polyprotein
Chain IDs:A, B
Chain Length:230
Number of Molecules:2
Biological Source:Zika virus
Ligand Molecules
Primary Citation
Discovery and Optimization of IRBM-Z-2, an Allosteric Zika Virus NS2B-NS3 Protease Inhibitor Exhibiting In Vivo Efficacy.
J.Med.Chem. 69 13492 13503 (2026)
PMID: 42213869 DOI: 10.1021/acs.jmedchem.6c00476

Abstact

Zika virus is an increasing medical and socio-economic burden in (sub)tropical regions, with no effective treatments available. Previously, we identified a novel series of N-carbamoylsydnone imine derivatives as potent ZIKV NS2B-NS3 protease inhibitors through phenotypic antiviral screening. Here, we report the optimization of this series, leading to IRBM-Z-2, a nanomolar inhibitor active in both biochemical and cellular assays, exhibiting no cytotoxicity. IRBM-Z-2 demonstrates favorable oral bioavailability, low clearance, and strong prophylactic efficacy in mouse models of ZIKV infection. These results highlight IRBM-Z-2 as a promising therapeutic candidate against ZIKV and a potential foundation for developing broad-spectrum orthoflavirus agents.

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Protein

Chemical

Disease

Primary Citation of related structures
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