8OUG image
Deposition Date 2023-04-22
Release Date 2024-05-01
Last Version Date 2026-06-03
Entry Detail
PDB ID:
8OUG
Keywords:
Title:
Exo-beta-d-glucosaminidase from Pyrococcus chitonophagus
Biological Source:
Source Organism(s):
Expression System(s):
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.21
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Beta-galactosidase
Gene (Uniprot):A3L04_10820, CHITON_1401
Chain IDs:A
Chain Length:781
Number of Molecules:1
Biological Source:Thermococcus chitonophagus
Primary Citation
Crystal structure, thermostability and temperature-dependent enzymatic activity of an exo-beta-d-glucosaminidase from Pyrococcus chitonophagus.
J.Struct.Biol. ? 108327 108327 (2026)
PMID: 42177926 DOI: 10.1016/j.jsb.2026.108327

Abstact

Pch-GlmA is a hyperthermophilic GH35 exo-beta-d-glucosaminidase whose structure closely resembles its archaeal homologs, yet its functional behavior differs markedly. Calorimetric and fluorimetric temperature scans consistently reveal a complex thermodynamic profile of the enzyme, characterized by distinct thermal transitions. The freshly purified protein appears to be monomeric and required thermal annealing to attain its biologically relevant dimeric state. Catalytic activity is observed only above 75 degrees C, where the enzyme specifically hydrolyses the glycosidic bond of GlcN-GlcNAc. These findings support a sequential role for Pch-GlmA alongside Pch-Dac in the processing of chitin-derived carbohydrates. Comparison with related GlmA proteins demonstrates that substantial structural similarity does not necessarily translate into equivalent enzymatic properties and that hyperthermophilic enzymes may operate within narrow temperature ranges. Overall, this work underscores the importance of experimental validation when interpreting or predicting the activity of enzymes derived from extremophiles.

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Primary Citation of related structures
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