7XDT image
Deposition Date 2022-03-28
Release Date 2022-08-24
Last Version Date 2025-07-02
Entry Detail
PDB ID:
7XDT
Title:
Structural basis for Gemin5 decamer-mediated mRNA binding
Biological Source:
Source Organism(s):
Homo sapiens (Taxon ID: 9606)
Expression System(s):
Method Details:
Experimental Method:
Resolution:
3.31 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Gem-associated protein 5
Gene (Uniprot):GEMIN5
Chain IDs:A, B, C, D, E, F, G, H, I, J
Chain Length:671
Number of Molecules:10
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structural basis for Gemin5 decamer-mediated mRNA binding.
Nat Commun 13 5166 5166 (2022)
PMID: 36056043 DOI: 10.1038/s41467-022-32883-z

Abstact

Gemin5 in the Survival Motor Neuron (SMN) complex serves as the RNA-binding protein to deliver small nuclear RNAs (snRNAs) to the small nuclear ribonucleoprotein Sm complex via its N-terminal WD40 domain. Additionally, the C-terminal region plays an important role in regulating RNA translation by directly binding to viral RNAs and cellular mRNAs. Here, we present the three-dimensional structure of the Gemin5 C-terminal region, which adopts a homodecamer architecture comprised of a dimer of pentamers. By structural analysis, mutagenesis, and RNA-binding assays, we find that the intact pentamer/decamer is critical for the Gemin5 C-terminal region to bind cognate RNA ligands and to regulate mRNA translation. The Gemin5 high-order architecture is assembled via pentamerization, allowing binding to RNA ligands in a coordinated manner. We propose a model depicting the regulatory role of Gemin5 in selective RNA binding and translation. Therefore, our work provides insights into the SMN complex-independent function of Gemin5.

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Primary Citation of related structures
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