7BQI image
Deposition Date 2020-03-24
Release Date 2020-08-05
Last Version Date 2024-04-03
Entry Detail
PDB ID:
7BQI
Title:
Crystal structure of FYCO1 RUN domain
Biological Source:
Source Organism(s):
Homo sapiens (Taxon ID: 9606)
Expression System(s):
Method Details:
Experimental Method:
Resolution:
1.30 Å
R-Value Free:
0.23
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 41 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:FYVE and coiled-coil domain-c
Gene (Uniprot):FYCO1
Chain IDs:A
Chain Length:183
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Crystal structure of the FYCO1 RUN domain suggests possible interfaces with small GTPases.
Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun. 76 326 333 (2020)
PMID: 32744243 DOI: 10.1107/S2053230X20009012

Abstact

FYCO1 is a multidomain adaptor protein that plays an important role in autophagy by mediating the kinesin-dependent microtubule plus-end-directed transport of autophagosomes. FYCO1 contains a RUN domain, which is hypothesized to function as a specific effector for members of the Ras superfamily of small GTPases, but its role has not been well characterized and its interaction partner(s) have not been identified. Here, the crystal structure of the FYCO1 RUN domain was determined at 1.3 Å resolution. The overall structure of the FYCO1 RUN domain was similar to those of previously reported RUN domains. Detailed structural comparisons with other RUN domains and docking studies suggested a possible interaction interface of the FYCO1 RUN domain with small GTPases of the Ras superfamily.

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Primary Citation of related structures
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