6JXR image
Deposition Date 2019-04-24
Release Date 2019-09-11
Last Version Date 2025-06-25
Entry Detail
PDB ID:
6JXR
Keywords:
Title:
Structure of human T cell receptor-CD3 complex
Biological Source:
Source Organism(s):
Homo sapiens (Taxon ID: 9606)
Expression System(s):
Method Details:
Experimental Method:
Resolution:
3.70 Å
Aggregation State:
CELL
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:T-cell surface glycoprotein C
Gene (Uniprot):CD247
Chain IDs:A (auth: a), B (auth: b)
Chain Length:164
Number of Molecules:2
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:T-cell surface glycoprotein C
Gene (Uniprot):CD3D
Chain IDs:C (auth: d)
Chain Length:171
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:T-cell surface glycoprotein C
Gene (Uniprot):CD3E
Chain IDs:D (auth: f), H (auth: e)
Chain Length:207
Number of Molecules:2
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:T-cell surface glycoprotein C
Gene (Uniprot):CD3G
Chain IDs:E (auth: g)
Chain Length:182
Number of Molecules:1
Biological Source:Homo sapiens
Protein Blast
Polymer Type:polypeptide(L)
Molecule:T cell receptor alpha variabl
Gene (Uniprot):TRAV12-3, Tcr-alpha, TRAC
Chain IDs:F (auth: m)
Chain Length:252
Number of Molecules:1
Biological Source:Homo sapiens
Protein Blast
Polymer Type:polypeptide(L)
Molecule:T cell receptor beta variable
Gene (Uniprot):TRBV6-5, TRB
Chain IDs:G (auth: n)
Chain Length:291
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structural basis of assembly of the human T cell receptor-CD3 complex.
Nature 573 546 552 (2019)
PMID: 31461748 DOI: 10.1038/s41586-019-1537-0

Abstact

The αβ T cell receptor (TCR), in association with the CD3γε-CD3δε-CD3ζζ signalling hexamer, is the primary determinant of T cell development and activation, and of immune responses to foreign antigens. The mechanism of assembly of the TCR-CD3 complex remains unknown. Here we report a cryo-electron microscopy structure of human TCRαβ in complex with the CD3 hexamer at 3.7 Å resolution. The structure contains the complete extracellular domains and all the transmembrane helices of TCR-CD3. The octameric TCR-CD3 complex is assembled with 1:1:1:1 stoichiometry of TCRαβ:CD3γε:CD3δε:CD3ζζ. Assembly of the extracellular domains of TCR-CD3 is mediated by the constant domains and connecting peptides of TCRαβ that pack against CD3γε-CD3δε, forming a trimer-like structure proximal to the plasma membrane. The transmembrane segment of the CD3 complex adopts a barrel-like structure formed by interaction of the two transmembrane helices of CD3ζζ with those of CD3γε and CD3δε. Insertion of the transmembrane helices of TCRαβ into the barrel-like structure via both hydrophobic and ionic interactions results in transmembrane assembly of the TCR-CD3 complex. Together, our data reveal the structural basis for TCR-CD3 complex assembly, providing clues to TCR triggering and a foundation for rational design of immunotherapies that target the complex.

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Primary Citation of related structures
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