5ZCN image
Deposition Date 2018-02-19
Release Date 2018-10-17
Last Version Date 2024-10-09
Entry Detail
PDB ID:
5ZCN
Title:
Solution NMR structure of a new lasso peptide brevunsin
Biological Source:
Source Organism(s):
Expression System(s):
Method Details:
Experimental Method:
Conformers Calculated:
300
Conformers Submitted:
15
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:brevunsin
Chain IDs:A
Chain Length:21
Number of Molecules:1
Biological Source:Brevundimonas diminuta
Ligand Molecules
Primary Citation
Heterologous production of a new lasso peptide brevunsin in Sphingomonas subterranea
J. Ind. Microbiol. Biotechnol. 45 983 992 (2018)
PMID: 30191430 DOI: 10.1007/s10295-018-2077-6

Abstact

A shuttle vector pHSG396Sp was constructed to perform gene expression using Sphingomonas subterranea as a host. A new lasso peptide biosynthetic gene cluster, derived from Brevundimonas diminuta, was amplified by PCR and integrated to afford a expression vector pHSG396Sp-12697L. The new lasso peptide brevunsin was successfully produced by S. subterranea, harboring the expression vector, with a high production yield (10.2 mg from 1 L culture). The chemical structure of brevunsin was established by NMR and MS/MS experiments. Based on the information obtained from the NOE experiment, the three-dimensional structure of brevunsin was determined, which indicated that brevunsin possessed a typical lasso structure. This expression vector system provides a new heterologous production method for unexplored lasso peptides that are encoded by bacterial genomes.

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Primary Citation of related structures
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