5HBA image
Deposition Date 2015-12-31
Release Date 2016-07-27
Last Version Date 2024-10-16
Entry Detail
PDB ID:
5HBA
Keywords:
Title:
Globular Domain of Zebrafish Complement 1qA protein
Biological Source:
Source Organism(s):
Danio rerio (Taxon ID: 7955)
Expression System(s):
Method Details:
Experimental Method:
Resolution:
2.05 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Uncharacterized protein
Gene (Uniprot):c1qa
Chain IDs:A, B, C
Chain Length:134
Number of Molecules:3
Biological Source:Danio rerio
Ligand Molecules
Primary Citation
Crystal structure of zebrafish complement 1qA globular domain.
Protein Sci. 25 1883 1889 (2016)
PMID: 27391278 DOI: 10.1002/pro.2980

Abstact

C1q contains three globular domains (C1qgD) that are the key functional component of the classical complement system. C1qgD can interact with important immune molecules, including IgG and C-reactive protein (CRP) to form defense systems to protect animals. Here, the first non-mammalian structure, zebrafish C1qA globular domain (Dare-C1qAgD) was solved. Although the overall architecture of Dare-C1qAgD is similar to human C1qA, residues involved in C1qBgD, C1qCgD, and CRP binding are somewhat different while residues involved in IgG binding are not present in zebrafish. The structure gives insight into how human and fish C1qA evolved from an ancestral protein.

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Chemical

Disease

Primary Citation of related structures
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