3FVU image
Deposition Date 2009-01-16
Release Date 2009-05-19
Last Version Date 2023-11-22
Entry Detail
PDB ID:
3FVU
Title:
Crystal Structure of Human Kynurenine Aminotransferase I in Complex with Indole-3-acetic Acid
Biological Source:
Source Organism(s):
Homo sapiens (Taxon ID: 9606)
Expression System(s):
Method Details:
Experimental Method:
Resolution:
1.55 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Kynurenine--oxoglutarate tran
Gene (Uniprot):KYAT1
Chain IDs:A, B
Chain Length:422
Number of Molecules:2
Biological Source:Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
LLP A LYS ?
Primary Citation
Structural insight into the inhibition of human kynurenine aminotransferase I/glutamine transaminase K
J. Med. Chem. 52 2786 2793 (2009)
PMID: 19338303 DOI: 10.1021/jm9000874

Abstact

Human kynurenine aminotransferase I (hKAT I) catalyzes the formation of kynurenic acid, a neuroactive compound. Here, we report three high-resolution crystal structures (1.50-1.55 A) of hKAT I that are in complex with glycerol and each of two inhibitors of hKAT I: indole-3-acetic acid (IAC) and Tris. Because Tris is able to occupy the substrate binding position, we speculate that this may be the basis for hKAT I inhibition. Furthermore, the hKAT/IAC complex structure reveals that the binding moieties of the inhibitor are its indole ring and a carboxyl group. Six chemicals with both binding moieties were tested for their ability to inhibit hKAT I activity; 3-indolepropionic acid and DL-indole-3-lactic acid demonstrated the highest level of inhibition, and as they cannot be considered as substrates of the enzyme, these two inhibitors are promising candidates for future study. Perhaps even more significantly, we report the discovery of two different ligands located simultaneously in the hKAT I active center for the first time.

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Primary Citation of related structures
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