3CGA image
Deposition Date 2008-03-05
Release Date 2008-09-30
Last Version Date 2024-02-21
Entry Detail
PDB ID:
3CGA
Title:
Crystal structure of metastasis-associated protein S100A4 in the active, calcium-bound form
Biological Source:
Source Organism(s):
Homo sapiens (Taxon ID: )
Expression System(s):
Method Details:
Experimental Method:
Resolution:
2.03 Å
R-Value Free:
0.33
R-Value Observed:
0.25
Space Group:
P 65
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Protein S100-A4
Gene (Uniprot):S100A4
Chain IDs:A, B
Chain Length:101
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Crystal structure of metastasis-associated protein S100A4 in the active calcium-bound form
J. Mol. Biol. 383 62 77 (2008)
PMID: 18783790 DOI: 10.1016/j.jmb.2008.04.076

Abstact

S100A4 (metastasin) is a member of the S100 family of calcium-binding proteins that is directly involved in tumorigenesis. Until recently, the only structural information available was the solution NMR structure of the inactive calcium-free form of the protein. Here we report the crystal structure of human S100A4 in the active calcium-bound state at 2.03 A resolution that was solved by molecular replacement in the space group P6(5) with two molecules in the asymmetric unit from perfectly merohedrally twinned crystals. The Ca(2+)-bound S100A4 structure reveals a large conformational change in the three-dimensional structure of the dimeric S100A4 protein upon calcium binding. This calcium-dependent conformational change opens up a hydrophobic binding pocket that is capable of binding to target proteins such as annexin A2, the tumor-suppressor protein p53 and myosin IIA. The structure of the active form of S100A4 provides insight into its interactions with its binding partners and a better understanding of its role in metastasis.

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Chemical

Disease

Primary Citation of related structures
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