ISDA: 37NN

Deposition Date 2026-07-28

Release Date 2026-09-30

Last Version Date 2026-09-30

Entry Detail

PDB ID:

37NN

Keywords:

DNA BINDING PROTEIN

Title:

Crystal structure of the R. denitrificans GapR bound to 10mer DNA duplex (DNA visible)

Biological Source:

Source Organism(s):

Roseobacter denitrificans (Taxon ID: 2434)
synthetic construct (Taxon ID: 32630)

Expression System(s):

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

3.75 Å

R-Value Free:

0.28

R-Value Work:

0.25

R-Value Observed:

0.26

Space Group:

P 1

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Macromolecular Entities

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:GapR
Gene (Uniprot):RD1_2835
Chain IDs:A, B, C (auth: D), D (auth: E), E (auth: G), F (auth: H), G (auth: I), H (auth: J)
Chain Length:0
Number of Molecules:8
Biological Source:Roseobacter denitrificans

UniProt ID:Q165I2 Pfam ID:PF10073

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*TP*AP*AP*TP*TP*AP*
Chain IDs:I (auth: W), J (auth: Z), K (auth: T), L (auth: X)
Chain Length:0
Number of Molecules:4
Biological Source:synthetic construct

Ligand Molecules

SO4

Primary Citation

Crystal structure of the R. denitrificans GapR bound to 10mer DNA duplex (DNA visible)

Schumacher, M.A.Show

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