30YX image
Deposition Date 2026-05-18
Release Date 2026-06-17
Last Version Date 2026-06-17
Entry Detail
PDB ID:
30YX
Keywords:
Title:
adhesion device (C3 symmetrized reconstruction) of the phage OE33PA
Biological Source:
Source Organism(s):
Method Details:
Experimental Method:
Resolution:
2.70 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Distal tail protein
Chain IDs:F (auth: A), J (auth: B), K (auth: C), L (auth: D), M (auth: E), N (auth: F)
Chain Length:659
Number of Molecules:6
Biological Source:Oenococcus phage phiOE33PA
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:tape measure protein
Chain IDs:O (auth: G), P (auth: H), Q (auth: I), R (auth: J), S (auth: K), T (auth: L)
Chain Length:57
Number of Molecules:6
Biological Source:Oenococcus phage phiOE33PA
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:tail-associated dlysin
Chain IDs:G (auth: M), H (auth: N), I (auth: O)
Chain Length:351
Number of Molecules:3
Biological Source:Oenococcus phage phiOE33PA
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Major tail protein
Chain IDs:A (auth: Y), B (auth: a), C (auth: b), D (auth: c), E (auth: d), U (auth: Z)
Chain Length:659
Number of Molecules:6
Biological Source:Oenococcus phage phiOE33PA
Ligand Molecules
Primary Citation
Dynamic adhesion device of phage OE33PA drives Gram-positive host recognition.
Biorxiv ? ? ? (2026)
PMID: 42244550 DOI: 10.64898/2026.05.20.726473

Abstact

Bacteriophages (phages) infecting Gram-positive bacteria must bind to host receptors across thick cell walls to initiate infection, yet the underlying structural mechanisms remain unclear. Here, we report cryo-electron microscopy structures of the Oenococcus oeni siphophage OE33PA, providing the first atomic resolution view of a phage infecting this bacterium important for the wine industry. While the overall virion architecture is conserved, the adhesion device displays distinctive features. Its receptor-binding proteins adopt multiple orientations, revealing an intrinsically dynamic assembly. In situ cryo-electron tomography captures distinct conformations upon host attachment, providing rare structural insight into interactions with Gram-positive hosts. Additionally, functional assays show that a highly mobile carbohydrate-binding module in the distal tail protein mediates host-specific binding. Furthermore, the tape measure protein, central to phage assembly and infectivity, adopts a hexameric organization, updating the prevailing trimeric model in siphophages. Together, these findings reveal a dynamic adhesion device in a phage infecting Gram-positive bacteria and highlight the structural and functional diversity of phages.

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Chemical

Disease

Primary Citation of related structures
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