30YT image
Deposition Date 2026-05-18
Release Date 2026-06-17
Last Version Date 2026-06-17
Entry Detail
PDB ID:
30YT
Keywords:
Title:
Capsid-connector assembly of the phage OE33PA
Biological Source:
Source Organism(s):
Method Details:
Experimental Method:
Resolution:
3.60 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:portal protein
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L
Chain Length:389
Number of Molecules:12
Biological Source:Oenococcus phage phiOE33PA
Structural Superimposition Protein Blast
Polymer Type:polypeptide(L)
Molecule:Major Capsid Protein
Chain IDs:M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA (auth: a), BA (auth: b), CA (auth: c), DA (auth: d), EA (auth: e), FA (auth: f), GA (auth: g), HA (auth: h), IA (auth: i), JA (auth: j), KA (auth: k), LA (auth: l), MA (auth: m), NA (auth: n), OA (auth: o), PA (auth: p)
Chain Length:389
Number of Molecules:30
Biological Source:Oenococcus phage phiOE33PA
Ligand Molecules
Primary Citation
Dynamic adhesion device of phage OE33PA drives Gram-positive host recognition.
Biorxiv ? ? ? (2026)
PMID: 42244550 DOI: 10.64898/2026.05.20.726473

Abstact

Bacteriophages (phages) infecting Gram-positive bacteria must bind to host receptors across thick cell walls to initiate infection, yet the underlying structural mechanisms remain unclear. Here, we report cryo-electron microscopy structures of the Oenococcus oeni siphophage OE33PA, providing the first atomic resolution view of a phage infecting this bacterium important for the wine industry. While the overall virion architecture is conserved, the adhesion device displays distinctive features. Its receptor-binding proteins adopt multiple orientations, revealing an intrinsically dynamic assembly. In situ cryo-electron tomography captures distinct conformations upon host attachment, providing rare structural insight into interactions with Gram-positive hosts. Additionally, functional assays show that a highly mobile carbohydrate-binding module in the distal tail protein mediates host-specific binding. Furthermore, the tape measure protein, central to phage assembly and infectivity, adopts a hexameric organization, updating the prevailing trimeric model in siphophages. Together, these findings reveal a dynamic adhesion device in a phage infecting Gram-positive bacteria and highlight the structural and functional diversity of phages.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
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