ISDA: 24XI

Deposition Date 2026-03-23

Release Date 2026-06-24

Last Version Date 2026-06-24

Entry Detail

PDB ID:

24XI

Keywords:

OXIDOREDUCTASE

Title:

Crystal structure of the diaminopimelate dehydrogenase from Pyrococcus sp. in its holo form

Biological Source:

Source Organism(s):

Pyrococcus sp. (Taxon ID: 33866)

Expression System(s):

Escherichia coli bl21(de3)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.90 Å

R-Value Free:

0.22

R-Value Work:

0.19

R-Value Observed:

0.19

Space Group:

P 1 21 1

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Diaminopimelate dehydrogenase
Chain IDs:A, B, C, D, E, F
Chain Length:311
Number of Molecules:6
Biological Source:Pyrococcus sp.

Ligand Molecules

ACT

EPE

MRD

NDP

Primary Citation

D-amino acid dehydrogenase from archaeon Pyrococcus sp. stereoselectively aminates alpha-keto acids using NADH or NADPH

Rudina, J.V, Matyuta, I.O, Bakunova, A.K, Boyko, K.M, Popov, V.O, Bezsudnov, E.Y.Show

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Primary Citation of related structures

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