ISDA: 11HE

Deposition Date 2026-02-24

Release Date 2026-09-02

Last Version Date 2026-09-16

Entry Detail

PDB ID:

11HE

Keywords:

RIBOSOME

Title:

Rabbit 60S ribosomal subunit with eEF2 domain IV closed

Biological Source:

Source Organism(s):

Oryctolagus cuniculus (Taxon ID: 9986)

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

2.86 Å

Aggregation State:

CELL

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Ribosomal protein L10
Gene (Uniprot):RPL10
Chain IDs:K (auth: 10)
Chain Length:213
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:B7NZQ2 Pfam ID:PF00252

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L11
Gene (Uniprot):RPL11
Chain IDs:L (auth: 11)
Chain Length:170
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1TUB8 Pfam ID:PF00281, PF00673

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:M (auth: 13)
Chain Length:210
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L14
Gene (Uniprot):RPL14
Chain IDs:N (auth: 14)
Chain Length:138
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1SZ12 Pfam ID:PF01929

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L15
Gene (Uniprot):RPL15
Chain IDs:O (auth: 15)
Chain Length:203
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1T0C1 Pfam ID:PF00827

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L17
Gene (Uniprot):RPL17
Chain IDs:Q (auth: 17)
Chain Length:153
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1SCJ6 Pfam ID:PF00237

Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L19
Chain IDs:R (auth: 19)
Chain Length:180
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:S (auth: 20)
Chain Length:192
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L21
Gene (Uniprot):RPL21
Chain IDs:T (auth: 21)
Chain Length:159
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1SHQ2 Pfam ID:PF01157

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:U (auth: 22)
Chain Length:99
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L23
Gene (Uniprot):RPL23
Chain IDs:V (auth: 23)
Chain Length:131
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1T6D1 Pfam ID:PF00238

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Ribosomal protein L24
Gene (Uniprot):RPL24
Chain IDs:W (auth: 24)
Chain Length:63
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1SE28 Pfam ID:PF01246

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L26
Gene (Uniprot):RPL26
Chain IDs:Y (auth: 26)
Chain Length:134
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1SQH0 Pfam ID:PF16906, PF00467

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L27
Gene (Uniprot):RPL27
Chain IDs:Z (auth: 27)
Chain Length:135
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1TXF6 Pfam ID:PF00467, PF01777

Polymer Type:polyribonucleotide
Molecule:28S rRNA
Chain IDs:WA (auth: 28)
Chain Length:4807
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):RPL29
Chain IDs:BA (auth: 29)
Chain Length:245
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1SGR6 Pfam ID:PF01779

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L30
Gene (Uniprot):RPL30
Chain IDs:CA (auth: 30)
Chain Length:98
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1TDL2 Pfam ID:PF01248

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L31
Gene (Uniprot):RPL31
Chain IDs:DA (auth: 31)
Chain Length:107
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1SHG0 Pfam ID:PF01198

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:EA (auth: 32)
Chain Length:128
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L34
Gene (Uniprot):RPL34
Chain IDs:GA (auth: 34)
Chain Length:114
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1TXG5 Pfam ID:PF01199

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L35
Gene (Uniprot):RPL35
Chain IDs:HA (auth: 35)
Chain Length:122
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1SIT5 Pfam ID:PF00831

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L36
Gene (Uniprot):RPL36
Chain IDs:IA (auth: 36)
Chain Length:102
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1TTQ5 Pfam ID:PF01158

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L37
Gene (Uniprot):RPL37
Chain IDs:JA (auth: 37)
Chain Length:86
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:U3KPD5 Pfam ID:PF01907

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:KA (auth: 38)
Chain Length:69
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L39
Gene (Uniprot):LOC100343258
Chain IDs:LA (auth: 39)
Chain Length:50
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1TTN1 Pfam ID:PF00832

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):UBA52
Chain IDs:MA (auth: 40)
Chain Length:52
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:P0DXC2 Pfam ID:PF01020

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:eL42
Chain IDs:NA (auth: 42)
Chain Length:104
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:A0A5F9D391 Pfam ID:PF00935

Polymer Type:polyribonucleotide
Molecule:5S rRNA
Chain IDs:B (auth: 5)
Chain Length:120
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

Polymer Type:polyribonucleotide
Molecule:5.8S rRNA
Chain IDs:A (auth: 58)
Chain Length:156
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Proliferation-associated prot
Gene (Uniprot):PA2G4
Chain IDs:SA (auth: EB)
Chain Length:375
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:Q9UQ80 Pfam ID:PF00557

Polymer Type:polyribonucleotide
Molecule:ES27L
Chain IDs:VA (auth: ES)
Chain Length:5070
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L3
Gene (Uniprot):RPL3
Chain IDs:D (auth: L3)
Chain Length:394
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1TL06 Pfam ID:PF00297

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L4
Chain IDs:E (auth: L4)
Chain Length:362
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:A0A5F9DCT1 Pfam ID:PF00573, PF14374

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L5
Gene (Uniprot):RPL5
Chain IDs:F (auth: L5)
Chain Length:293
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:P19949 Pfam ID:PF17144, PF14204

Polymer Type:polypeptide(L)
Molecule:large ribosomal subunit prote
Chain IDs:G (auth: L6)
Chain Length:347
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L7
Gene (Uniprot):RPL7
Chain IDs:H (auth: L7)
Chain Length:225
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1SV32 Pfam ID:PF08079, PF00327

Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L8
Chain IDs:C (auth: L8)
Chain Length:345
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L9
Gene (Uniprot):RPL9
Chain IDs:J (auth: L9)
Chain Length:190
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1SWI6 Pfam ID:PF00347

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:UA (auth: Q)
Chain Length:188
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:I (auth: aa)
Chain Length:240
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):RPL13A
Chain IDs:P (auth: bb)
Chain Length:199
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1TVS8 Pfam ID:PF00572

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Gene (Uniprot):RPL23A
Chain IDs:X (auth: cc)
Chain Length:118
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1SE76 Pfam ID:PF03939, PF00276

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L27a
Gene (Uniprot):RPL27A
Chain IDs:AA (auth: dd)
Chain Length:147
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1SNY0 Pfam ID:PF00828

Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit prote
Chain IDs:FA (auth: ee)
Chain Length:109
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L37a
Gene (Uniprot):RPL37A
Chain IDs:OA (auth: ff)
Chain Length:91
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1SY53 Pfam ID:PF01780

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L28
Gene (Uniprot):RPL28
Chain IDs:PA (auth: gg)
Chain Length:124
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1U7L1 Pfam ID:PF01778

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:60S acidic ribosomal protein
Gene (Uniprot):RPLP0
Chain IDs:QA (auth: s)
Chain Length:196
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1SPK4 Pfam ID:PF00466, PF17777

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:uL11
Gene (Uniprot):RPL12
Chain IDs:RA (auth: t)
Chain Length:153
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1SMR7 Pfam ID:PF03946, PF00298

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L10a
Gene (Uniprot):RPL10A
Chain IDs:TA (auth: u)
Chain Length:206
Number of Molecules:1
Biological Source:Oryctolagus cuniculus

UniProt ID:G1SKZ8 Pfam ID:PF00687

Structures with similar UniProt ID

Structural Superimposition Protein Blast

Polymer Type:polypeptide(L)
Molecule:Elongation factor 2
Gene (Uniprot):EEF2
Chain IDs:XA (auth: v)
Chain Length:857
Number of Molecules:1
Biological Source:Oryctolagus cuniculus