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Structural Superimposition

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Source ID & Chain

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Structural Entry Filters:

Organisms
- Homo sapiens (10)
- Chikungunya virus strain s27-african prototype (7)
- Escherichia coli 'bl21-gold(de3)plyss ag' (2)
- Dokdonia eikasta (1)
- Legionella pneumophila (1)
- Caenorhabditis elegans (1)
- Tobacco mosaic virus (1)
- Methanosarcina mazei (1)
Methods
- ELECTRON MICROSCOPY (21)
- X-RAY DIFFRACTION (1)
Years
- 2025 (1)
- 2024 (2)
- 2023 (9)
- 2022 (4)
- 2020 (4)
- 2019 (1)
- 2018 (1)
Symmetry
- P 1 (17)
- P 1 21 1 (1)
Ligands
- GTP (3)
- NAD (2)
- SAH (2)
- EDO (2)
- BME (2)
- PEG (2)
- PGE (2)
- OLC (1)
- LFA (1)
- RET (1)
- OLA (1)
- MGP (1)
- SAM (1)
- MY6 (1)
- NAG (1)
- UDP (1)
- S1N (1)
Resolution
- 2.0 - 2.5 (1)
- 2.5 - 3.0 (3)
- 3.0 - 3.5 (1)
- 3.5 - 4.0 (1)

Search Count: 22

All Selected

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8RQ5

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Cryo-Em Structure Of The Light-Driven Sodium-Pumping Rhodopsin Kr2

Organism: Dokdonia eikasta
Method: ELECTRON MICROSCOPY
Resolution:2.32 Å Release Date: 2025-01-29
Classification: MEMBRANE PROTEIN
Ligands: OLC, LFA, RET, NA, OLA

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8RQ5

Organism: Dokdonia eikasta
Method: ELECTRON MICROSCOPY
Release Date: 2025-01-29
Ligands: OLC, LFA, RET, NA, OLA

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8PHZ

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Helical Reconstruction Of Chikv Nsp3 Helical Scaffolds

Organism: Chikungunya virus strain s27-african prototype
Method: ELECTRON MICROSCOPY
Release Date: 2024-08-14
Classification: VIRAL PROTEIN
Ligands: ZN

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8PHZ

Organism: Chikungunya virus strain s27-african prototype
Method: ELECTRON MICROSCOPY
Release Date: 2024-08-14
Ligands: ZN

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8PK7

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Helical Reconstruction Of Chikv Nsp3 Helical Scaffolds

Organism: Chikungunya virus strain s27-african prototype
Method: ELECTRON MICROSCOPY
Release Date: 2024-08-14
Classification: VIRAL PROTEIN
Ligands: ZN

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8PK7

Organism: Chikungunya virus strain s27-african prototype
Method: ELECTRON MICROSCOPY
Release Date: 2024-08-14
Ligands: ZN

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8QFS

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Cryo-Em Structure Of Sidh From Legionella Pneumophila

Organism: Escherichia coli 'bl21-gold(de3)plyss ag'
Method: ELECTRON MICROSCOPY
Release Date: 2023-10-11
Classification: RNA BINDING PROTEIN
Ligands: MG, GTP

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8QFS

Organism: Escherichia coli 'bl21-gold(de3)plyss ag'
Method: ELECTRON MICROSCOPY
Release Date: 2023-10-11
Ligands: MG, GTP

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8QHC

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Cryo-Em Structure Of Sidh From Legionella Pneumophila In Complex With Lubx

Organism: Legionella pneumophila, Escherichia coli 'bl21-gold(de3)plyss ag'
Method: ELECTRON MICROSCOPY
Release Date: 2023-10-11
Classification: RNA BINDING PROTEIN
Ligands: MG, GTP

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8QHC

Organism: Legionella pneumophila, Escherichia coli 'bl21-gold(de3)plyss ag'
Method: ELECTRON MICROSCOPY
Release Date: 2023-10-11
Ligands: MG, GTP

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8P2L

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A Chimera Construct Containing Human Sarm1 Arm And Sam Domains And C. Elegans Tir Domain.

Organism: Homo sapiens
Method: ELECTRON MICROSCOPY
Resolution:2.68 Å Release Date: 2023-09-06
Classification: HYDROLASE
Ligands: NAD

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8P2L

Organism: Homo sapiens
Method: ELECTRON MICROSCOPY
Release Date: 2023-09-06
Ligands: NAD

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8P2M

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C. Elegans Tir-1 Protein.

Organism: Caenorhabditis elegans
Method: ELECTRON MICROSCOPY
Resolution:3.82 Å Release Date: 2023-09-06
Classification: HYDROLASE

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8P2M

Organism: Caenorhabditis elegans
Method: ELECTRON MICROSCOPY
Release Date: 2023-09-06

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8AOV

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Cryoem Structure Of The Chikungunya Virus Nsp1 Capping Pores In Complex With Gtp

Organism: Chikungunya virus strain s27-african prototype
Method: ELECTRON MICROSCOPY
Release Date: 2023-05-31
Classification: VIRAL PROTEIN
Ligands: ZN, GTP

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8AOV

Organism: Chikungunya virus strain s27-african prototype
Method: ELECTRON MICROSCOPY
Release Date: 2023-05-31
Ligands: ZN, GTP

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8APX

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Cryoem Structure Of The Chikungunya Virus Nsp1 Capping Pores In Covalent Complex With A 7Gmp Cap Structure

Organism: Chikungunya virus strain s27-african prototype
Method: ELECTRON MICROSCOPY
Release Date: 2023-05-03
Classification: VIRAL PROTEIN
Ligands: ZN, SAH

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8APX

Organism: Chikungunya virus strain s27-african prototype
Method: ELECTRON MICROSCOPY
Release Date: 2023-05-03
Ligands: ZN, SAH

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8AOW

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Cryoem Structure Of The Chikungunya Virus Nsp1 Capping Pores In Complex With M7Gtp And Sah Ligands

Organism: Chikungunya virus strain s27-african prototype
Method: ELECTRON MICROSCOPY
Release Date: 2023-03-29
Classification: VIRAL PROTEIN
Ligands: ZN, SAH, MGP, MG

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8AOW

Organism: Chikungunya virus strain s27-african prototype
Method: ELECTRON MICROSCOPY
Release Date: 2023-03-29
Ligands: ZN, SAH, MGP, MG

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8AOX

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Cryoem Structure Of The Chikungunya Virus Nsp1 Capping Pores In Complex With Sam

Organism: Chikungunya virus strain s27-african prototype
Method: ELECTRON MICROSCOPY
Release Date: 2023-03-29
Classification: VIRAL PROTEIN
Ligands: ZN, SAM

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8AOX

Organism: Chikungunya virus strain s27-african prototype
Method: ELECTRON MICROSCOPY
Release Date: 2023-03-29
Ligands: ZN, SAM

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8AXV

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Structure Of An Open Form Of Chikv Nsp1 Capping Pores

Organism: Chikungunya virus strain s27-african prototype
Method: ELECTRON MICROSCOPY
Release Date: 2023-03-29
Classification: VIRAL PROTEIN
Ligands: ZN, MY6

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8AXV

Organism: Chikungunya virus strain s27-african prototype
Method: ELECTRON MICROSCOPY
Release Date: 2023-03-29
Ligands: ZN, MY6

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7QG0

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Inhibitor-Induced Hsarm1 Duplex

Organism: Homo sapiens
Method: ELECTRON MICROSCOPY
Release Date: 2022-12-21
Classification: APOPTOSIS

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7QG0

Organism: Homo sapiens
Method: ELECTRON MICROSCOPY
Release Date: 2022-12-21

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7ZAY

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Human Heparan Sulfate Polymerase Complex Ext1-Ext2

Organism: Homo sapiens
Method: ELECTRON MICROSCOPY
Release Date: 2022-12-07
Classification: TRANSFERASE
Ligands: NAG, UDP

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7ZAY

Organism: Homo sapiens
Method: ELECTRON MICROSCOPY
Release Date: 2022-12-07
Ligands: NAG, UDP

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6RLP

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Cryo-Em Reconstruction Of Tmv Coat Protein

Organism: Tobacco mosaic virus
Method: ELECTRON MICROSCOPY
Release Date: 2022-11-23
Classification: VIRAL PROTEIN

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6RLP

Organism: Tobacco mosaic virus
Method: ELECTRON MICROSCOPY
Release Date: 2022-11-23

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8AZA

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Structure Of Rip2K Dimer Bound To The Xiap Bir2 Domain

Organism: Homo sapiens
Method: ELECTRON MICROSCOPY
Release Date: 2022-10-26
Classification: IMMUNE SYSTEM
Ligands: ZN

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8AZA

Organism: Homo sapiens
Method: ELECTRON MICROSCOPY
Release Date: 2022-10-26
Ligands: ZN

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6ZFX

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Hsarm1 Grafix-Ed

Organism: Homo sapiens
Method: ELECTRON MICROSCOPY
Resolution:2.88 Å Release Date: 2020-11-18
Classification: HYDROLASE
Ligands: S1N

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6ZFX

Organism: Homo sapiens
Method: ELECTRON MICROSCOPY
Release Date: 2020-11-18
Ligands: S1N

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6ZG0

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Sarm1 Sam1-2 Domains

Organism: Homo sapiens
Method: ELECTRON MICROSCOPY
Release Date: 2020-11-11
Classification: HYDROLASE
Ligands: EDO, BME, PEG, PGE

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6ZG0

Organism: Homo sapiens
Method: ELECTRON MICROSCOPY
Release Date: 2020-11-11
Ligands: EDO, BME, PEG, PGE

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6ZG1

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Sarm1 Sam1-2 Domains

Organism: Homo sapiens
Method: ELECTRON MICROSCOPY
Release Date: 2020-11-11
Classification: HYDROLASE
Ligands: EDO, BME, PEG, PGE

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6ZG1

Organism: Homo sapiens
Method: ELECTRON MICROSCOPY
Release Date: 2020-11-11
Ligands: EDO, BME, PEG, PGE

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7ANW

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Hsarm1 Nad+ Complex

Organism: Homo sapiens
Method: ELECTRON MICROSCOPY
Resolution:2.68 Å Release Date: 2020-11-11
Classification: APOPTOSIS
Ligands: NAD

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7ANW

Organism: Homo sapiens
Method: ELECTRON MICROSCOPY
Release Date: 2020-11-11
Ligands: NAD

Structural Superimposition 3D-Fold Search Interaction Explorer

Protein Functional Filters:

Enzyme
- Hydrolases (14)
- Transferases (12)
Uniprots
- Q8JUX6 (7)
- Q6SZW1 (6)
- O43353 (3)
- E2QJ06 (2)
- Q6RCQ4 (2)
- Q86DA5 (2)
- N0DKS8 (1)
- A0A2S6F0E3 (1)
- Q16394 (1)
- Q93063 (1)
- A0A348G6U1 (1)
- P98170 (1)
- A0A0F8NYV9 (1)
PFAM
- PF07647 (7)
- PF13676 (6)
- PF01660 (5)
- PF01661 (2)
- PF20852 (2)
- PF03144 (2)
- PF03143 (2)
- PF00009 (2)
- PF00619 (2)
- PF04564 (1)
- PF00536 (1)
- PF03016 (1)
- PF09258 (1)
- PF00721 (1)
- PF07714 (1)
- PF00653 (1)

Address

Indian Biological Data Centre, Regional Centre for Biotechnology, NCR Biotech Science Cluster, 3rd Milestone

Faridabad-Gurugram Expressway, Faridabad - 121 001

External Links

IBDC
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