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Structural Superimposition

Target ID & Chain

Source ID & Chain

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Structural Entry Filters:

Organisms
- Porcine epidemic diarrhea virus (39)
- Sus scrofa (6)
- Synthetic construct (3)
- Bos taurus (1)
- Homo sapiens (1)
Methods
- X-RAY DIFFRACTION (21)
- ELECTRON MICROSCOPY (18)
Years
- 2026 (11)
- 2025 (8)
- 2024 (1)
- 2023 (2)
- 2022 (6)
- 2021 (3)
- 2020 (3)
- 2019 (1)
- 2017 (1)
- 2016 (3)
Symmetry
- P 1 (18)
- P 1 21 1 (15)
- H 3 (2)
- P 21 21 21 (2)
- P 61 (1)
- C 2 2 21 (1)
Ligands
- NAG (16)
- PAM (5)
- A1BWH (1)
- AYE (1)
- X77 (1)
- MLA (1)
- K36 (1)
- IPA (1)
- MPD (1)
- DMS (1)
Resolution
- 1.0 - 1.5 (1)
- 1.5 - 2.0 (12)
- 2.0 - 2.5 (9)
- 2.5 - 3.0 (4)
- 3.0 - 3.5 (2)
- 3.5 - 4.0 (3)

Search Count: 39

All Selected

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43YY

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Cryo-Em Structure Of N19 Fab : D0D-S1A

Organism: Porcine epidemic diarrhea virus, Sus scrofa
Method: ELECTRON MICROSCOPY
Resolution:2.30 Å Release Date: 2026-08-05
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Ligands: NAG

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

43YY

Organism: Porcine epidemic diarrhea virus, Sus scrofa
Method: ELECTRON MICROSCOPY
Release Date: 2026-08-05
Ligands: NAG

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9XNX

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Focus Refinement Of Pedv Hnxx Spike Monomer With D0 Up

Organism: Porcine epidemic diarrhea virus
Method: ELECTRON MICROSCOPY
Resolution:2.69 Å Release Date: 2026-08-05
Classification: VIRAL PROTEIN
Ligands: NAG, PAM

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9XNX

Organism: Porcine epidemic diarrhea virus
Method: ELECTRON MICROSCOPY
Release Date: 2026-08-05
Ligands: NAG, PAM

Structural Superimposition 3D-Fold Search Interaction Explorer

9XNY

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Focus Refinement Of Pedv Hnxx Spike Monomer With D0 Down In Complex With N19 Fab

Organism: Porcine epidemic diarrhea virus, Sus scrofa
Method: ELECTRON MICROSCOPY
Resolution:2.20 Å Release Date: 2026-08-05
Classification: VIRAL PROTEIN
Ligands: NAG, PAM

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9XNY

Organism: Porcine epidemic diarrhea virus, Sus scrofa
Method: ELECTRON MICROSCOPY
Release Date: 2026-08-05
Ligands: NAG, PAM

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9XO1

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Pedv Hnxx Spike Trimer With Two D0 Down In Complex With Two N19 Fabs

Organism: Porcine epidemic diarrhea virus, Sus scrofa
Method: ELECTRON MICROSCOPY
Resolution:2.42 Å Release Date: 2026-08-05
Classification: VIRAL PROTEIN
Ligands: NAG, PAM

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9XO1

Organism: Porcine epidemic diarrhea virus, Sus scrofa
Method: ELECTRON MICROSCOPY
Release Date: 2026-08-05
Ligands: NAG, PAM

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9XO2

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Pedv Hnxx Spike Trimer With One D0 Down In Complex With One N19 Fab

Organism: Porcine epidemic diarrhea virus, Sus scrofa
Method: ELECTRON MICROSCOPY
Resolution:2.71 Å Release Date: 2026-08-05
Classification: VIRAL PROTEIN
Ligands: NAG, PAM

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9XO2

Organism: Porcine epidemic diarrhea virus, Sus scrofa
Method: ELECTRON MICROSCOPY
Release Date: 2026-08-05
Ligands: NAG, PAM

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9XO3

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Pedv Hnxx Spike Trimer With One D0 Down

Organism: Porcine epidemic diarrhea virus
Method: ELECTRON MICROSCOPY
Resolution:3.80 Å Release Date: 2026-08-05
Classification: VIRAL PROTEIN
Ligands: NAG

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9XO3

Organism: Porcine epidemic diarrhea virus
Method: ELECTRON MICROSCOPY
Release Date: 2026-08-05
Ligands: NAG

Structural Superimposition 3D-Fold Search Interaction Explorer

9XO4

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Pedv Hnxx Spike Trimer With Two D0 Down

Organism: Porcine epidemic diarrhea virus
Method: ELECTRON MICROSCOPY
Resolution:3.69 Å Release Date: 2026-08-05
Classification: VIRAL PROTEIN
Ligands: NAG

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9XO4

Organism: Porcine epidemic diarrhea virus
Method: ELECTRON MICROSCOPY
Release Date: 2026-08-05
Ligands: NAG

Structural Superimposition 3D-Fold Search Interaction Explorer

9XO5

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Pedv Hnxx S Trimer With Three D0 Down

Organism: Porcine epidemic diarrhea virus
Method: ELECTRON MICROSCOPY
Resolution:3.75 Å Release Date: 2026-08-05
Classification: VIRAL PROTEIN
Ligands: NAG

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9XO5

Organism: Porcine epidemic diarrhea virus
Method: ELECTRON MICROSCOPY
Release Date: 2026-08-05
Ligands: NAG

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9XTU

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Pedv S1B Domain In Complex With Porcine Antibodies C62 And N34

Organism: Sus scrofa, Porcine epidemic diarrhea virus
Method: ELECTRON MICROSCOPY
Resolution:2.96 Å Release Date: 2026-07-22
Classification: VIRAL PROTEIN
Ligands: NAG

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9XTU

Organism: Sus scrofa, Porcine epidemic diarrhea virus
Method: ELECTRON MICROSCOPY
Release Date: 2026-07-22
Ligands: NAG

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9N9T

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Crystal Structure Of Main Protease Of Pedv In Complex With Avi8122

Organism: Porcine epidemic diarrhea virus
Method: X-RAY DIFFRACTION
Resolution:1.50 Å Release Date: 2026-02-18
Classification: VIRAL PROTEIN
Ligands: A1BWH

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9N9T

Organism: Porcine epidemic diarrhea virus
Method: X-RAY DIFFRACTION
Release Date: 2026-02-18
Ligands: A1BWH

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9L7N

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Pedv 3Clpro Mutant (C144A) In Complex With Nsp12/13 Peptite Substrate

Organism: Porcine epidemic diarrhea virus
Method: X-RAY DIFFRACTION
Resolution:2.23 Å Release Date: 2026-01-14
Classification: VIRAL PROTEIN

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9L7N

Organism: Porcine epidemic diarrhea virus
Method: X-RAY DIFFRACTION
Release Date: 2026-01-14

Structural Superimposition 3D-Fold Search Interaction Explorer

9L6N

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Pedv 3Clpro Mutant (C144A) In Complex With Nsp5/6 Peptite Substrate

Organism: Porcine epidemic diarrhea virus
Method: X-RAY DIFFRACTION
Resolution:2.30 Å Release Date: 2025-12-31
Classification: VIRAL PROTEIN

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9L6N

Organism: Porcine epidemic diarrhea virus
Method: X-RAY DIFFRACTION
Release Date: 2025-12-31

Structural Superimposition 3D-Fold Search Interaction Explorer

9L7B

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Pedv 3Clpro Mutant (C144A) In Complex With Nsp13/14 Peptite Substrate

Organism: Porcine epidemic diarrhea virus
Method: X-RAY DIFFRACTION
Resolution:2.31 Å Release Date: 2025-12-31
Classification: VIRAL PROTEIN

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9L7B

Organism: Porcine epidemic diarrhea virus
Method: X-RAY DIFFRACTION
Release Date: 2025-12-31

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9L4S

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Pedv 3Clpro Mutant (C144A) In Complex With Nsp15/16 Peptite Substrate

Organism: Porcine epidemic diarrhea virus
Method: X-RAY DIFFRACTION
Resolution:1.96 Å Release Date: 2025-12-24
Classification: VIRAL PROTEIN

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9L4S

Organism: Porcine epidemic diarrhea virus
Method: X-RAY DIFFRACTION
Release Date: 2025-12-24

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9KZ3

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Pedv 3Clpro Mutant (C144A) In Complex With Nsp8|9 Peptite Substrate

Organism: Porcine epidemic diarrhea virus
Method: X-RAY DIFFRACTION
Resolution:1.93 Å Release Date: 2025-12-17
Classification: VIRAL PROTEIN

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9KZ3

Organism: Porcine epidemic diarrhea virus
Method: X-RAY DIFFRACTION
Release Date: 2025-12-17

Structural Superimposition 3D-Fold Search Interaction Explorer

9KZF

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Pedv 3Clpro Mutant (C144A) In Complex With Nsp7/8 Peptite Substrate

Organism: Porcine epidemic diarrhea virus
Method: X-RAY DIFFRACTION
Resolution:1.78 Å Release Date: 2025-12-17
Classification: VIRAL PROTEIN

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9KZF

Organism: Porcine epidemic diarrhea virus
Method: X-RAY DIFFRACTION
Release Date: 2025-12-17

Structural Superimposition 3D-Fold Search Interaction Explorer

9KZS

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Pedv 3Clpro Mutant (C144A) In Complex With Nsp10/11 Peptite Substrate

Organism: Porcine epidemic diarrhea virus
Method: X-RAY DIFFRACTION
Resolution:1.88 Å Release Date: 2025-12-17
Classification: VIRAL PROTEIN

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9KZS

Organism: Porcine epidemic diarrhea virus
Method: X-RAY DIFFRACTION
Release Date: 2025-12-17

Structural Superimposition 3D-Fold Search Interaction Explorer

9JUF

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Pedv 3Clpro Mutant (C144A) In Complex With Nsp9|10 Peptidyl Substrate

Organism: Porcine epidemic diarrhea virus
Method: X-RAY DIFFRACTION
Resolution:1.95 Å Release Date: 2025-10-22
Classification: VIRAL PROTEIN

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9JUF

Organism: Porcine epidemic diarrhea virus
Method: X-RAY DIFFRACTION
Release Date: 2025-10-22

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8XPI

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Structure Of The C-Terminal Domain Of Nsp4 From Pedv

Organism: Porcine epidemic diarrhea virus
Method: X-RAY DIFFRACTION
Resolution:1.84 Å Release Date: 2025-01-15
Classification: VIRAL PROTEIN

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8XPI

Organism: Porcine epidemic diarrhea virus
Method: X-RAY DIFFRACTION
Release Date: 2025-01-15

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8WQK

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Crystal Structure Of The C-Terminal Domain Of Pedv Nucleocapsid Protein

Organism: Porcine epidemic diarrhea virus
Method: X-RAY DIFFRACTION
Resolution:2.88 Å Release Date: 2024-10-16
Classification: VIRAL PROTEIN

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8WQK

Organism: Porcine epidemic diarrhea virus
Method: X-RAY DIFFRACTION
Release Date: 2024-10-16

Structural Superimposition 3D-Fold Search Interaction Explorer

Protein Functional Filters:

Enzyme
- Hydrolases (21)
- Transferases (18)
- Lyases (1)
Uniprots
- A0A7G4RNN0 (8)
- A0A023J7B5 (8)
- A0A1Y0DD46 (6)
- K4L9I6 (3)
- M9PMH7 (1)
- J7IL17 (1)
- P0C6V6 (1)
- A0A0P0TE07 (1)
- Q07499 (1)
- U6BRU0 (1)
- A0A0U2C263 (1)
- A0A1Z2R8Q6 (1)
- A0A0M4AW09 (1)
- A0A0U2C377 (1)
- P62992 (1)
- A0A0S3MQV7 (1)
- P0CG47 (1)
- S0AP56 (1)
- S5RJN4 (1)
- W8QLX4 (1)
- R4JK63 (1)
- A0A1N7TG28 (1)
- A0A075EBR7 (1)
PFAM
- PF19209 (7)
- PF01600 (7)
- PF01601 (7)
- PF05409 (5)
- PF08715 (3)
- PF00240 (2)
- PF16348 (1)
- PF00937 (1)
- PF06478 (1)
- PF08717 (1)
- PF00680 (1)
- PF08716 (1)

Address

Indian Biological Data Centre, Regional Centre for Biotechnology, NCR Biotech Science Cluster, 3rd Milestone

Faridabad-Gurugram Expressway, Faridabad - 121 001

External Links

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