Structural Complex
Chemical ID: YBM
IUPAC Name: [(3S)-3-{[(2-amino-4-hydroxy-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]amino}-4-hydroxybutyl]phosphonic acid
Formal Charge: 0
Type: non-polymer
Substructure
Substruture Type: MurckoScaffold
SMILES: c1ncc2[nH]ccc2n1
InChI: InChI=1S/C6H5N3/c1-2-8-6-3-7-4-9-5(1)6/h1-4,8H
InChI Key: KDOPAZIWBAHVJB-UHFFFAOYSA-N
Physiochemical Descriptor:
Formula: C11 H18 N5 O5 P
Molecular weight: 331.265
Hydrogen Bond Acceptor: 9
Hydrogen Bond Donor: 7
Rotatable Bonds: 12
Heavy Atoms: 22
Systematic name
Program Version Descriptor
ACDLabs 12.01 [(3S)-3-{[(2-amino-4-hydroxy-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]amino}-4-hydroxybutyl]phosphonic acid
OpenEye OEToolkits 2.0.7 [(3~{S})-3-[(2-azanyl-4-oxidanyl-5~{H}-pyrrolo[3,2-d]pyrimidin-7-yl)methylamino]-4-oxidanyl-butyl]phosphonic acid
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=P(O)(O)CCC(CO)NCc1c[NH]c2c(O)nc(N)nc21
InChI InChI 1.03 InChI=1S/C11H18N5O5P/c12-11-15-8-6(4-14-9(8)10(18)16-11)3-13-7(5-17)1-2-22(19,20)21/h4,7,13-14,17H,1-3,5H2,(H2,19,20,21)(H3,12,15,16,18)/t7-/m0/s1
InChIKey InChI 1.03 WDBHHLGLZFXXDD-ZETCQYMHSA-N
SMILES_CANONICAL CACTVS 3.385 Nc1nc(O)c2[nH]cc(CN[C@H](CO)CC[P](O)(O)=O)c2n1
SMILES CACTVS 3.385 Nc1nc(O)c2[nH]cc(CN[CH](CO)CC[P](O)(O)=O)c2n1
SMILES_CANONICAL OpenEye OEToolkits 2.0.7 c1c(c2c([nH]1)c(nc(n2)N)O)CN[C@@H](CCP(=O)(O)O)CO
SMILES OpenEye OEToolkits 2.0.7 c1c(c2c([nH]1)c(nc(n2)N)O)CNC(CCP(=O)(O)O)CO
Chemical Database Mapping
Database Reference ID
PubChem 165618877
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