9WT1 image
Deposition Date 2025-09-15
Release Date 2026-05-06
Last Version Date 2026-05-06
Entry Detail
PDB ID:
9WT1
Title:
CryoEM structure of cap module in the contracted AlgoCIS
Biological Source:
Source Organism(s):
Method Details:
Experimental Method:
Resolution:
3.20 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Putative phage tail sheath pr
Gene (Uniprot):ALPR1_12755
Chain IDs:B (auth: 1A), C (auth: 2A), G (auth: 1B), H (auth: 2B), L (auth: 1C), M (auth: 2C), Q (auth: 1D), R (auth: 2D), V (auth: 1E), W (auth: 2E), AA (auth: 1F), BA (auth: 2F)
Chain Length:142
Number of Molecules:12
Biological Source:Algoriphagus machipongonensis
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Phage tail protein
Gene (Uniprot):ALPR1_12750
Chain IDs:D (auth: 1a), E (auth: 2a), I (auth: 1b), J (auth: 2b), N (auth: 1c), O (auth: 2c), S (auth: 1d), T (auth: 2d), X (auth: 1e), Y (auth: 2e), CA (auth: 1f), DA (auth: 2f)
Chain Length:142
Number of Molecules:12
Biological Source:Algoriphagus machipongonensis
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Pvc16 N-terminal domain-conta
Gene (Uniprot):ALPR1_12765
Chain IDs:A, F (auth: B), K (auth: C), P (auth: D), U (auth: E), Z (auth: F)
Chain Length:196
Number of Molecules:6
Biological Source:Algoriphagus machipongonensis
Ligand Molecules
Primary Citation
Stepwise firing mechanism of an extracellular contractile injection system.
Nat Commun ? ? ? (2026)
PMID: 42031783 DOI: 10.1038/s41467-026-72240-y

Abstact

Contractile injection systems (CISs) mediate cell-cell interactions and are widespread among bacteria and archaea. These phage tail-like macromolecular machines puncture their target by a tube that is propelled by a contractile sheath. The mechanism underlying CIS firing, which starts with target binding and ends with sheath contraction, remains unclear. Here, we investigate the extracellular CIS from Algoriphagus machipongonensis (AlgoCIS) by a multimodal cryo-electron microscopy approach and structure-guided engineering, which allowed us to arrest AlgoCIS in multiple intermediate states of firing. Together with the post-firing structure, our data suggest a stepwise firing mechanism involving all structural modules: signal propagation starts with the binding of the tail-fibers, followed by opening of the cage, an expansion of the baseplate iris, and resulting in sheath contraction and the release of cap adaptor. Our study will serve as a framework for understanding the firing mechanism of diverse CISs and will facilitate the engineering of CISs for biomedical applications.

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Primary Citation of related structures
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