9RPD image
Deposition Date 2025-06-24
Release Date 2025-08-27
Last Version Date 2025-08-27
Entry Detail
PDB ID:
9RPD
Keywords:
Title:
D. melanogaster Augmin TII N-clamp (GST-fusion) bound to a microtubule, well-defined subset of particles
Biological Source:
Source Organism(s):
Expression System(s):
Method Details:
Experimental Method:
Resolution:
4.90 Å
Aggregation State:
HELICAL ARRAY
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Tubulin alpha-1A chain
Gene (Uniprot):TUBA1A
Chain IDs:F (auth: A), G (auth: C), H (auth: G), I (auth: E)
Chain Length:451
Number of Molecules:4
Biological Source:Sus scrofa
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Tubulin beta chain
Chain IDs:D (auth: B), E (auth: D)
Chain Length:445
Number of Molecules:2
Biological Source:Sus scrofa
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Augmin complex subunit dgt4
Gene (Uniprot):dgt4
Chain IDs:A (auth: I)
Chain Length:108
Number of Molecules:1
Biological Source:Drosophila melanogaster
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Augmin complex subunit dgt6
Gene (Uniprot):dgt6
Chain IDs:B (auth: J)
Chain Length:280
Number of Molecules:1
Biological Source:Drosophila melanogaster
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Augmin complex subunit msd5,G
Gene (Uniprot):GFP, msd5
Chain IDs:C (auth: K)
Chain Length:672
Number of Molecules:1
Biological Source:Drosophila melanogaster, Aequorea victoria, Schistosoma japonicum
Ligand Molecules
Primary Citation
Conserved function of the HAUS6 calponin homology domain in anchoring augmin for microtubule branching.
Nat Commun 16 7845 7845 (2025)
PMID: 40846850 DOI: 10.1038/s41467-025-63165-z

Abstact

Branching microtubule nucleation is a key mechanism for mitotic and meiotic spindle assembly and requires the hetero-octameric augmin complex. Augmin recruits the major microtubule nucleator, the γ-tubulin ring complex, to pre-existing microtubules to direct the formation of new microtubules in a defined orientation. Although recent structural work has provided key insights into the structural organization of augmin, molecular details of its interaction with microtubules remain elusive. Here, we identify the minimal conserved microtubule-binding unit of augmin across species and demonstrate that stable microtubule anchoring is predominantly mediated via the calponin homology (CH) domain in Dgt6/HAUS6. Comparative sequence and functional analyses in vitro and in vivo reveal a highly conserved functional role of the HAUS6 CH domain in microtubule binding. Using cryo-electron microscopy and molecular dynamics simulations in combination with AlphaFold structure predictions, we show that the D. melanogaster Dgt6/HAUS6 CH domain binds microtubules at the inter-protofilament groove between two adjacent β-tubulin subunits and thereby orients augmin on microtubules. Altogether, our findings reveal how augmin binds microtubules to pre-determine the branching angle during microtubule nucleation and facilitate the rapid assembly of complex microtubule networks.

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Disease

Primary Citation of related structures
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