6XJI image
Deposition Date 2020-06-23
Release Date 2020-10-14
Last Version Date 2025-05-28
Entry Detail
PDB ID:
6XJI
Title:
PmtCD ABC exporter at C1 symmetry
Biological Source:
Source Organism(s):
Expression System(s):
Method Details:
Experimental Method:
Resolution:
4.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Phenol-soluble modulin export
Chain IDs:A, B
Chain Length:266
Number of Molecules:2
Biological Source:Staphylococcus aureus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ABC transporter ATP-binding p
Gene (Uniprot):ybhF_2
Chain IDs:C, D
Chain Length:290
Number of Molecules:2
Biological Source:Staphylococcus aureus
Primary Citation
Structural insight into the Staphylococcus aureus ATP-driven exporter of virulent peptide toxins
Sci Adv 6 eabb8219 ? (2020)
PMID: 32998902 DOI: 10.1126/sciadv.abb8219

Abstact

Staphylococcus aureus is a major human pathogen that has acquired alarming broad-spectrum antibiotic resistance. One group of secreted toxins with key roles during infection is the phenol-soluble modulins (PSMs). PSMs are amphipathic, membrane-destructive cytolytic peptides that are exported to the host-cell environment by a designated adenosine 5'-triphosphate (ATP)-binding cassette (ABC) transporter, the PSM transporter (PmtABCD). Here, we demonstrate that the minimal Pmt unit necessary for PSM export is PmtCD and provide its first atomic characterization by single-particle cryo-EM and x-ray crystallography. We have captured the transporter in the ATP-bound state at near atomic resolution, revealing a type II ABC exporter fold, with an additional cytosolic domain. Comparison to a lower-resolution nucleotide-free map displaying an "open" conformation and putative hydrophobic inner chamber of a size able to accommodate the binding of two PSM peptides provides mechanistic insight and sets the foundation for therapeutic design.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
Feedback Form
Name
Email
Institute
Feedback