6WCV image
Deposition Date 2020-03-31
Release Date 2020-07-15
Last Version Date 2023-10-18
Entry Detail
PDB ID:
6WCV
Keywords:
Title:
Tartryl-CoA bound to human GTP-specific succinyl-CoA synthetase
Biological Source:
Source Organism(s):
Homo sapiens (Taxon ID: 9606)
Expression System(s):
Method Details:
Experimental Method:
Resolution:
1.52 Å
R-Value Free:
0.18
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Succinate--CoA ligase [ADP/GD
Gene (Uniprot):SUCLG1
Chain IDs:A
Chain Length:315
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Succinate--CoA ligase [GDP-fo
Gene (Uniprot):SUCLG2
Chain IDs:B
Chain Length:395
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Tartryl-CoA inhibits succinyl-CoA synthetase.
Acta Crystallogr F Struct Biol Commun 76 302 ? (2020)
PMID: 32627745 DOI: .

Abstact

Succinyl-CoA synthetase (SCS) catalyzes the only substrate-level phosphorylation step in the tricarboxylic acid cycle. Human GTP-specific SCS (GTPSCS), an αβ-heterodimer, was produced in Escherichia coli. The purified protein crystallized from a solution containing tartrate, CoA and magnesium chloride, and a crystal diffracted to 1.52 Å resolution. Tartryl-CoA was discovered to be bound to GTPSCS. The CoA portion lies in the amino-terminal domain of the α-subunit and the tartryl end extends towards the catalytic histidine residue. The terminal carboxylate binds to the phosphate-binding site of GTPSCS.

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Chemical

Disease

Primary Citation of related structures
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