4DJC image
Deposition Date 2012-02-01
Release Date 2012-02-22
Last Version Date 2024-02-28
Entry Detail
PDB ID:
4DJC
Title:
1.35 A crystal structure of the NaV1.5 DIII-IV-Ca/CaM complex
Biological Source:
Source Organism(s):
Homo sapiens (Taxon ID: 9606)
Expression System(s):
Method Details:
Experimental Method:
Resolution:
1.35 Å
R-Value Free:
0.17
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Calmodulin
Chain IDs:A
Chain Length:152
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Sodium channel protein type 5
Gene (Uniprot):SCN5A
Chain IDs:B
Chain Length:35
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Crystallographic basis for calcium regulation of sodium channels.
Proc. Natl. Acad. Sci. U.S.A. 109 3558 3563 (2012)
PMID: 22331908 DOI: 10.1073/pnas.1114748109

Abstact

Voltage-gated sodium channels underlie the rapid regenerative upstroke of action potentials and are modulated by cytoplasmic calcium ions through a poorly understood mechanism. We describe the 1.35 Å crystal structure of Ca(2+)-bound calmodulin (Ca(2+)/CaM) in complex with the inactivation gate (DIII-IV linker) of the cardiac sodium channel (Na(V)1.5). The complex harbors the positions of five disease mutations involved with long Q-T type 3 and Brugada syndromes. In conjunction with isothermal titration calorimetry, we identify unique inactivation-gate mutations that enhance or diminish Ca(2+)/CaM binding, which, in turn, sensitize or abolish Ca(2+) regulation of full-length channels in electrophysiological experiments. Additional biochemical experiments support a model whereby a single Ca(2+)/CaM bridges the C-terminal IQ motif to the DIII-IV linker via individual N and C lobes, respectively. The data suggest that Ca(2+)/CaM destabilizes binding of the inactivation gate to its receptor, thus biasing inactivation toward more depolarized potentials.

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Primary Citation of related structures
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