4B2Q image
Deposition Date 2012-07-17
Release Date 2012-08-29
Last Version Date 2024-05-08
Entry Detail
PDB ID:
4B2Q
Keywords:
Title:
Model of the yeast F1Fo-ATP synthase dimer based on subtomogram average
Biological Source:
Source Organism(s):
Method Details:
Experimental Method:
Resolution:
37.00 Å
Aggregation State:
CELL
Reconstruction Method:
TOMOGRAPHY
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATP SYNTHASE SUBUNIT ALPHA, M
Gene (Uniprot):ATP1
Chain IDs:A, C, X (auth: a), Z (auth: c)
Chain Length:485
Number of Molecules:4
Biological Source:SACCHAROMYCES CEREVISIAE
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATP SYNTHASE SUBUNIT ALPHA, M
Gene (Uniprot):ATP1
Chain IDs:B, Y (auth: b)
Chain Length:486
Number of Molecules:2
Biological Source:SACCHAROMYCES CEREVISIAE
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATP SYNTHASE SUBUNIT BETA, MI
Gene (Uniprot):ATP2
Chain IDs:D, AA (auth: d)
Chain Length:470
Number of Molecules:2
Biological Source:SACCHAROMYCES CEREVISIAE
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATP SYNTHASE SUBUNIT BETA, MI
Gene (Uniprot):ATP2
Chain IDs:E, F, BA (auth: e), CA (auth: f)
Chain Length:473
Number of Molecules:4
Biological Source:SACCHAROMYCES CEREVISIAE
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATP SYNTHASE SUBUNIT GAMMA, M
Gene (Uniprot):ATP3
Chain IDs:G, DA (auth: g)
Chain Length:278
Number of Molecules:2
Biological Source:SACCHAROMYCES CEREVISIAE
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATP SYNTHASE SUBUNIT DELTA, M
Gene (Uniprot):ATP16
Chain IDs:H, EA (auth: h)
Chain Length:132
Number of Molecules:2
Biological Source:SACCHAROMYCES CEREVISIAE
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATP SYNTHASE SUBUNIT EPSILON,
Gene (Uniprot):ATP15
Chain IDs:I, FA (auth: i)
Chain Length:59
Number of Molecules:2
Biological Source:SACCHAROMYCES CEREVISIAE
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATP SYNTHASE SUBUNIT 9, MITOC
Gene (Uniprot):OLI1
Chain IDs:J, K, L, M, N, O, P, Q, R, S, GA (auth: j), HA (auth: k), IA (auth: l), JA (auth: m), KA (auth: n), LA (auth: o), MA (auth: p), NA (auth: q), OA (auth: r), PA (auth: s)
Chain Length:76
Number of Molecules:20
Biological Source:SACCHAROMYCES CEREVISIAE
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATP SYNTHASE SUBUNIT B, MITOC
Gene (Uniprot):ATP5PB
Chain IDs:T, QA (auth: t)
Chain Length:129
Number of Molecules:2
Biological Source:BOS TAURUS
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATP SYNTHASE SUBUNIT D, MITOC
Gene (Uniprot):ATP5PD
Chain IDs:U, RA (auth: u)
Chain Length:120
Number of Molecules:2
Biological Source:BOS TAURUS
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATP SYNTHASE-COUPLING FACTOR
Gene (Uniprot):ATP5PF
Chain IDs:V, SA (auth: v)
Chain Length:66
Number of Molecules:2
Biological Source:BOS TAURUS
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATP SYNTHASE SUBUNIT O, MITOC
Gene (Uniprot):ATP5PO
Chain IDs:W, TA (auth: w)
Chain Length:120
Number of Molecules:2
Biological Source:BOS TAURUS
Primary Citation
Structure of the Yeast F1Fo-ATP Synthase Dimer and its Role in Shaping the Mitochondrial Cristae.
Proc. Natl. Acad. Sci. U.S.A. 109 13602 ? (2012)
PMID: 22864911 DOI: 10.1073/PNAS.1204593109

Abstact

We used electron cryotomography of mitochondrial membranes from wild-type and mutant Saccharomyces cerevisiae to investigate the structure and organization of ATP synthase dimers in situ. Subtomogram averaging of the dimers to 3.7 nm resolution revealed a V-shaped structure of twofold symmetry, with an angle of 86° between monomers. The central and peripheral stalks are well resolved. The monomers interact within the membrane at the base of the peripheral stalks. In wild-type mitochondria ATP synthase dimers are found in rows along the highly curved cristae ridges, and appear to be crucial for membrane morphology. Strains deficient in the dimer-specific subunits e and g or the first transmembrane helix of subunit 4 lack both dimers and lamellar cristae. Instead, cristae are either absent or balloon-shaped, with ATP synthase monomers distributed randomly in the membrane. Computer simulations indicate that isolated dimers induce a plastic deformation in the lipid bilayer, which is partially relieved by their side-by-side association. We propose that the assembly of ATP synthase dimer rows is driven by the reduction in the membrane elastic energy, rather than by direct protein contacts, and that the dimer rows enable the formation of highly curved ridges in mitochondrial cristae.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
Feedback Form
Name
Email
Institute
Feedback