3AJN image
Deposition Date 2010-06-09
Release Date 2011-02-16
Last Version Date 2024-10-23
Entry Detail
PDB ID:
3AJN
Keywords:
Title:
Structural basis of glycine amide on suppression of protein aggregation by high resolution X-ray analysis
Biological Source:
Source Organism(s):
Gallus gallus (Taxon ID: 9031)
Method Details:
Experimental Method:
Resolution:
1.05 Å
R-Value Free:
0.16
R-Value Work:
0.14
R-Value Observed:
0.14
Space Group:
P 43 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Lysozyme C
Gene (Uniprot):LYZ
Chain IDs:A
Chain Length:129
Number of Molecules:1
Biological Source:Gallus gallus
Primary Citation
Glycine amide shielding on the aromatic surfaces of lysozyme: Implication for suppression of protein aggregation
FEBS Lett. 585 555 560 (2011)
PMID: 21237160 DOI: 10.1016/j.febslet.2011.01.008

Abstact

Glycine amide (GlyAd), a typically amidated amino acid, is a versatile additive that suppresses protein aggregation during refolding, heat treatment, and crystallization. In spite of its effectiveness, the exact mechanism by which GlyAd suppresses protein aggregation remains to be elucidated. Here, we show the crystal structure of the GlyAd-lysozyme complex by high resolution X-ray crystallographic analysis at a 1.05Å resolution. GlyAd bound to the lysozyme surface near aromatic residues and decreased the amount of bound waters and increased the mobility of protein. Arg and GlyAd molecules are different in binding sites and patterns from glycerol and related compounds, indicating that decreasing hydrophobic patches might be involved in suppression of protein aggregation.

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Primary Citation of related structures
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