2KDG image
Deposition Date 2009-01-08
Release Date 2009-07-21
Last Version Date 2024-05-29
Entry Detail
PDB ID:
2KDG
Title:
Solution Structure of the 1st Ig domain of Myotilin
Biological Source:
Source Organism(s):
Homo sapiens (Taxon ID: 9606)
Expression System(s):
Method Details:
Experimental Method:
Conformers Calculated:
40
Conformers Submitted:
25
Selection Criteria:
structures with the least restraint violations, structures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Myotilin
Gene (Uniprot):MYOT
Chain IDs:A
Chain Length:100
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Solution structure of the first immunoglobulin domain of human myotilin
J. Biomol. NMR 44 107 112 (2009)
PMID: 19418025 DOI: 10.1007/s10858-009-9320-4

Abstact

Myotilin is a 57 kDa actin-binding and -bundling protein that consists of a unique serine-rich amino-terminus, two Ig-domains and a short carboxy-terminus with a PDZ-binding motif. Myotilin localizes in sarcomeric Z-discs, where it interacts with several sarcomeric proteins. Point mutations in myotilin cause muscle disorders morphologically highlighted by sarcomeric disarray and aggregation. The actin-binding and dimerization propensity of myotilin has been mapped to the Ig-domains. Here we present high-resolution structure of the first Ig-domain of myotilin (MyoIg1) determined with solution state NMR spectroscopy. Nearly complete chemical shift assignments of MyoIg1 were achieved despite several missing backbone 1H-15N-HSQC signals. The structure derived from distance and dihedral angle restraints using torsion angle dynamics was further refined using molecular dynamics. The structure of MyoIg1 exhibits I-type Ig-fold. The absence of several backbone 1H-15N-HSQC signals can be explained by conformational exchange taking place at the hydrophobic core of the protein.

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Primary Citation of related structures
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