1RN1 image
Deposition Date 1991-11-22
Release Date 1994-01-31
Last Version Date 2024-10-23
Entry Detail
PDB ID:
1RN1
Title:
THREE-DIMENSIONAL STRUCTURE OF GLN 25-RIBONUCLEASE T1 AT 1.84 ANGSTROMS RESOLUTION: STRUCTURAL VARIATIONS AT THE BASE RECOGNITION AND CATALYTIC SITES
Biological Source:
Source Organism(s):
Method Details:
Experimental Method:
Resolution:
1.84 Å
R-Value Work:
0.14
R-Value Observed:
0.14
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:RIBONUCLEASE T1 ISOZYME
Gene (Uniprot):rntA
Chain IDs:A, B, C
Chain Length:104
Number of Molecules:3
Biological Source:Aspergillus oryzae
Ligand Molecules
Primary Citation
Three-dimensional structure of Gln25-ribonuclease T1 at 1.84-A resolution: structural variations at the base recognition and catalytic sites.
Biochemistry 31 3126 3135 (1992)
PMID: 1554699 DOI: 10.1021/bi00127a013

Abstact

The structure of the Gln25 variant of ribonuclease T1 (RNase T1) crystallized at pH 7 and at high ionic strength has been solved by molecular replacement using the coordinates of the Lys25-RNase T1/2'-guanylic acid (2'GMP) complex at pH 5 [Arni et al. (1988) J. Biol. Chem. 263, 15358-15368] and refined by energy minimization and stereochemically restrained least-squares minimization to a crystallographic R-factor of 14.4% at 1.84-A resolution. The asymmetric unit contains three molecules, and the final model consists of 2302 protein atoms, 3 sulfates (at the catalytic sites), and 179 solvent water molecules. The estimated root mean square (rms) error in the coordinates is 0.15 A, and the rms deviation from ideality is 0.018 A for bond lengths and 1.8 degrees for bond angles. Significant differences are observed between the three molecules in the asymmetric unit at the base recognition and catalytic sites.

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Primary Citation of related structures
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