1KVW image
Deposition Date 1998-04-24
Release Date 1998-11-18
Last Version Date 2024-10-30
Entry Detail
PDB ID:
1KVW
Keywords:
Title:
CARBOXYLIC ESTER HYDROLASE, SINGLE MUTANT H48Q OF BOVINE PANCREATIC PLA2 ENZYME
Biological Source:
Source Organism(s):
Bos taurus (Taxon ID: 9913)
Expression System(s):
Method Details:
Experimental Method:
Resolution:
1.95 Å
R-Value Free:
0.31
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 31 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PHOSPHOLIPASE A2
Gene (Uniprot):PLA2G1B
Mutagens:H48Q
Chain IDs:A
Chain Length:123
Number of Molecules:1
Biological Source:Bos taurus
Ligand Molecules
Primary Citation
Structures of the catalytic site mutants D99A and H48Q and the calcium-loop mutant D49E of phospholipase A2.
Acta Crystallogr. D Biol. Crystallogr. 55 443 447 (1999)
PMID: 10089353 DOI: 10.1107/S0907444998013699

Abstact

Crystal structures of the active-site mutants D99A and H48Q and the calcium-loop mutant D49E of bovine phospholipase A2 have been determined at around 1.9 A resolution. The D99A mutant is isomorphous to the orthorhombic recombinant enzyme, space group P212121. The H48Q and the calcium-loop mutant D49E are isomorphous to the trigonal recombinant enzyme, space group P3121. The two active-site mutants show no major structural perturbations. The structural water is absent in D99A and, therefore, the hydrogen-bonding scheme is changed. In H48Q, the catalytic water is present and hydrogen bonded to Gln48 N, but the second water found in native His48 is absent. In the calcium-loop mutant D49E, the two water molecules forming the pentagonal bipyramid around calcium are absent and only one O atom of the Glu49 carboxylate group is coordinated to calcium, resulting in only four ligands.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
Feedback Form
Name
Email
Institute
Feedback