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Structural Superimposition

Target ID & Chain

Source ID & Chain

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Structural Entry Filters:

Organisms
- Saccharomyces cerevisiae (20)
- Mus musculus (10)
- Homo sapiens (8)
- Saccharomyces cerevisiae w303 (4)
- Saccharomyces cerevisiae (strain atcc 204508 / s288c) (1)
- Schizosaccharomyces pombe (strain 972 / atcc 24843) (1)
- Schizosaccharomyces pombe 972h- (1)
- Schizosaccharomyces pombe (1)
- Escherichia coli (1)
Methods
- ELECTRON MICROSCOPY (24)
- SOLUTION NMR (17)
- X-RAY DIFFRACTION (3)
Years
- 2024 (1)
- 2023 (16)
- 2022 (2)
- 2020 (4)
- 2019 (1)
- 2016 (2)
- 2004 (10)
- 2003 (5)
- 2002 (2)
- 1996 (1)
Symmetry
- P 1 (32)
- P 21 21 21 (1)
- P 65 2 2 (1)
- I 41 (1)
Ligands
- SPD (10)
- SF4 (2)
- ADP (2)
- ATP (1)
- MET (1)
- GCP (1)
- 3HE (1)
Resolution
- 1.0 - 1.5 (1)
- 1.5 - 2.0 (1)
- 2.5 - 3.0 (1)

Search Count: 44

All Selected

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9F9S

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Yeast Sdd1 Disome With Mbf1

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2024-12-04
Classification: RIBOSOME
Ligands: MG, ZN, K, SPD

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

9F9S

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2024-12-04
Ligands: MG, ZN, K, SPD

Structural Superimposition 3D-Fold Search Interaction Explorer

8C83

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Cryo-Em Structure Of In Vitro Reconstituted Otu2-Bound Ub-40S Complex

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-05-24
Classification: RIBOSOME

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

8C83

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-05-24

Structural Superimposition 3D-Fold Search Interaction Explorer

8CAH

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Cryo-Em Structure Of Native Otu2-Bound Ubiquitinated 43S Pre-Initiation Complex

Organism: Saccharomyces cerevisiae w303
Method: ELECTRON MICROSCOPY
Release Date: 2023-05-24
Classification: RIBOSOME
Ligands: MG, ZN, SF4, ADP

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

8CAH

Organism: Saccharomyces cerevisiae w303
Method: ELECTRON MICROSCOPY
Release Date: 2023-05-24
Ligands: MG, ZN, SF4, ADP

Structural Superimposition 3D-Fold Search Interaction Explorer

8CAS

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Cryo-Em Structure Of Native Otu2-Bound Ubiquitinated 48S Initiation Complex (Partial)

Organism: Saccharomyces cerevisiae w303, Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-05-24
Classification: RIBOSOME
Ligands: ZN, ADP, MG, ATP, SF4, MET, GCP

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

8CAS

Organism: Saccharomyces cerevisiae w303, Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-05-24
Ligands: ZN, ADP, MG, ATP, SF4, MET, GCP

Structural Superimposition 3D-Fold Search Interaction Explorer

8CBJ

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Cryo-Em Structure Of Otu2-Bound Cytoplasmic Pre-40S Ribosome Biogenesis Complex

Organism: Saccharomyces cerevisiae w303, Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-05-24
Classification: RIBOSOME
Ligands: ZN, MG

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

8CBJ

Organism: Saccharomyces cerevisiae w303, Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-05-24
Ligands: ZN, MG

Structural Superimposition 3D-Fold Search Interaction Explorer

8AAF

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Yeast Rqc Complex In State G

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-03-08
Classification: TRANSLATION
Ligands: MG, ZN, SPD

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

8AAF

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-03-08
Ligands: MG, ZN, SPD

Structural Superimposition 3D-Fold Search Interaction Explorer

8AGT

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Yeast Rqc Complex In State F

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-03-08
Classification: TRANSLATION
Ligands: MG, ZN

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

8AGT

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-03-08
Ligands: MG, ZN

Structural Superimposition 3D-Fold Search Interaction Explorer

8AGU

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Yeast Rqc Complex In State E

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-03-08
Classification: TRANSLATION
Ligands: MG, ZN, SPD

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

8AGU

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-03-08
Ligands: MG, ZN, SPD

Structural Superimposition 3D-Fold Search Interaction Explorer

8AGV

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Yeast Rqc Complex In State H

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-03-08
Classification: TRANSLATION
Ligands: MG, ZN

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

8AGV

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-03-08
Ligands: MG, ZN

Structural Superimposition 3D-Fold Search Interaction Explorer

8AGW

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Yeast Rqc Complex In State D

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-03-08
Classification: TRANSLATION
Ligands: MG, ZN, SPD

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

8AGW

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-03-08
Ligands: MG, ZN, SPD

Structural Superimposition 3D-Fold Search Interaction Explorer

8AGX

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Yeast Rqc Complex In State With The Ring Domain Of Ltn1 In The In Position

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-03-08
Classification: TRANSLATION
Ligands: MG, ZN, SPD

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

8AGX

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-03-08
Ligands: MG, ZN, SPD

Structural Superimposition 3D-Fold Search Interaction Explorer

8AGZ

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Yeast Rqc Complex In State With The Ring Domain Of Ltn1 In The Out Position

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-03-08
Classification: TRANSLATION
Ligands: MG, ZN, SPD

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

8AGZ

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-03-08
Ligands: MG, ZN, SPD

Structural Superimposition 3D-Fold Search Interaction Explorer

7ZPQ

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Structure Of The Rqt-Bound 80S Ribosome From S. Cerevisiae (C1)

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-02-22
Classification: RIBOSOME
Ligands: MG, ZN

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

7ZPQ

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-02-22
Ligands: MG, ZN

Structural Superimposition 3D-Fold Search Interaction Explorer

7ZRS

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Structure Of The Rqt-Bound 80S Ribosome From S. Cerevisiae (C2) - Composite Map

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-02-22
Classification: RIBOSOME
Ligands: MG, ZN

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

7ZRS

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-02-22
Ligands: MG, ZN

Structural Superimposition 3D-Fold Search Interaction Explorer

7ZS5

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Structure Of 60S Ribosomal Subunit From S. Cerevisiae With Eif6 And Trna

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-02-22
Classification: RIBOSOME
Ligands: MG

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

7ZS5

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-02-22
Ligands: MG

Structural Superimposition 3D-Fold Search Interaction Explorer

7ZUW

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Structure Of Rqt (C1) Bound To The Stalled Ribosome In A Disome Unit From S. Cerevisiae

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-02-22
Classification: RIBOSOME
Ligands: MG, ZN

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

7ZUW

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-02-22
Ligands: MG, ZN

Structural Superimposition 3D-Fold Search Interaction Explorer

7ZUX

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Collided Ribosome In A Disome Unit From S. Cerevisiae

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-02-22
Classification: RIBOSOME
Ligands: MG, ZN

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

7ZUX

Organism: Saccharomyces cerevisiae
Method: ELECTRON MICROSCOPY
Release Date: 2023-02-22
Ligands: MG, ZN

Structural Superimposition 3D-Fold Search Interaction Explorer

7QVP

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Human Collided Disome (Di-Ribosome) Stalled On Xbp1 Mrna

Organism: Homo sapiens
Method: ELECTRON MICROSCOPY
Release Date: 2022-10-12
Classification: TRANSLATION

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

7QVP

Organism: Homo sapiens
Method: ELECTRON MICROSCOPY
Release Date: 2022-10-12

Structural Superimposition 3D-Fold Search Interaction Explorer

7ZW0

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Fap-80S Complex - Rotated State

Organism: Saccharomyces cerevisiae w303
Method: ELECTRON MICROSCOPY
Release Date: 2022-10-05
Classification: RIBOSOME
Ligands: MG, SPD, ZN

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

7ZW0

Organism: Saccharomyces cerevisiae w303
Method: ELECTRON MICROSCOPY
Release Date: 2022-10-05
Ligands: MG, SPD, ZN

Structural Superimposition 3D-Fold Search Interaction Explorer

6TB3

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Yeast 80S Ribosome In Complex With The Not5 Subunit Of The Ccr4-Not Complex

Organism: Saccharomyces cerevisiae (strain atcc 204508 / s288c)
Method: ELECTRON MICROSCOPY
Release Date: 2020-04-22
Classification: TRANSLATION
Ligands: MG, ZN, SPD

Structural Superimposition 3D-Fold Search Interaction Explorer Distance Explorer

6TB3

Organism: Saccharomyces cerevisiae (strain atcc 204508 / s288c)
Method: ELECTRON MICROSCOPY
Release Date: 2020-04-22
Ligands: MG, ZN, SPD

Structural Superimposition 3D-Fold Search Interaction Explorer

Protein Functional Filters:

Enzyme
- Hydrolases (10)
- Transferases (9)
- Lyases (1)
- Isomerases (1)
Uniprots
- P0CH08 (21)
- P05737 (19)
- Q12690 (19)
- P36105 (19)
- P26784 (19)
- P05740 (19)
- P0CX49 (19)
- P0CX82 (19)
- P0CX23 (19)
- Q02753 (19)
- P0CX41 (19)
- P0CX25 (19)
- P0CX27 (19)
- P04650 (19)
- P49166 (19)
- P05745 (19)
- P0CX84 (19)
- P87262 (19)
- P05744 (19)
- P0C2H8 (19)
- P14120 (19)
- P02406 (19)
- P0C2H6 (19)
- P05743 (19)
- P04456 (19)
PFAM
- PF00467 (24)
- PF01248 (23)
- PF00827 (20)
- PF00238 (20)
- PF01280 (20)
- PF17144 (20)
- PF00297 (20)
- PF01781 (20)
- PF01929 (20)
- PF01780 (20)
- PF00347 (20)
- PF00828 (20)
- PF08079 (20)
- PF01157 (20)
- PF01159 (20)
- PF03939 (20)
- PF01199 (20)
- PF00573 (20)
- PF03947 (20)
- PF00281 (20)
- PF01776 (20)
- PF00935 (20)
- PF14374 (20)
- PF00181 (20)
- PF14204 (20)

Address

Indian Biological Data Centre, Regional Centre for Biotechnology, NCR Biotech Science Cluster, 3rd Milestone

Faridabad-Gurugram Expressway, Faridabad - 121 001

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