9NQ5 image
Deposition Date 2025-03-11
Release Date 2026-03-25
Last Version Date 2026-03-25
Entry Detail
PDB ID:
9NQ5
Keywords:
LYASE
Title:
D-Ornithine/D-lysine decarboxylase C387A complexed with HEPES, putrescine, and D-ornithine
Biological Source:
Source Organism(s):
Salmonella enterica subsp. enterica serovar Typhimurium (Taxon ID: 90371)
Expression System(s):
Escherichia coli bl21(de3)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.74 Å
R-Value Free:
0.20
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 21 21 21
9NQ5 validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:D-ornithine/D-lysine decarbox
Gene (Uniprot):dokD
Mutagens:C387A
Chain IDs:A
Chain Length:478
Number of Molecules:1
Biological Source:Salmonella enterica subsp. enterica serovar Typhimurium
UniProt ID:Q8ZNC4 Pfam ID:PF00278, PF02784 EC:4.1.1.116
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:D-ornithine/D-lysine decarbox
Gene (Uniprot):dokD
Mutagens:C387A
Chain IDs:B
Chain Length:478
Number of Molecules:1
Biological Source:Salmonella enterica subsp. enterica serovar Typhimurium
UniProt ID:Q8ZNC4 Pfam ID:PF00278, PF02784 EC:4.1.1.116
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
LLP A LYS modified residue
Ligand Molecules
CL
DMS
EDO
EPE
GOL
K
NA
ORD
PMP
PUT
Primary Citation
D-Ornithine/D-lysine decarboxylase C387A complexed with HEPES, putrescine, and D-ornithine
To Be Published ? ? ? (?)
Primary Citation of related structures
9NQ5
Feedback Form
Name
Email
Institute
Feedback