9HYE image
Deposition Date 2025-01-09
Release Date 2025-11-19
Last Version Date 2025-12-24
Entry Detail
PDB ID:
9HYE
Keywords:
Title:
Structure of the Mus musclus Langerin carbohydrate recognition domain with depleted Calcium
Biological Source:
Source Organism(s):
Mus musculus (Taxon ID: 10090)
Expression System(s):
Method Details:
Experimental Method:
Resolution:
1.64 Å
R-Value Free:
0.21
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:C-type lectin domain family 4
Gene (Uniprot):Cd207
Chain IDs:A, B
Chain Length:154
Number of Molecules:2
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
Calcium Competitive Inhibition of Langerin by Thiazolopyrimidinones.
J.Med.Chem. 68 24924 24934 (2025)
PMID: 41261040 DOI: 10.1021/acs.jmedchem.5c01756

Abstact

C-Type lectins are a large family of carbohydrate-binding proteins. Langerin is a member of this family and is expressed by Langerhans cells, involved in pathogen recognition and innate immune activation, making it a target for small-molecule modulation in immunology and infectious diseases. We previously identified thiazolopyrimidinones as a series of allosteric inhibitors, but the underlying mechanism remained unclear. In this study, 43Ca NMR demonstrated that these fragments induce Ca2+ release from the receptor. Our ITC data suggested a competitive relationship between inhibitors and Ca2+, which was further validated by 19F NMR spectroscopy showing inhibition of carbohydrate binding. Surprisingly, the fragment binding site was found to be located beneath the long loop, which supports the dynamic nature of the long loop being highly Ca2+ dependent. Our findings provide insight into the novel Ca2+-competitive inhibitory mechanism of murine langerin and are the first report on such an inhibitory mechanism for a C-type lectin.

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Primary Citation of related structures
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