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<header>
<COM>Banana proteome</COM>
<Date>2018-09-22T10:27:19Z</Date>
<USERNAME>kumaravel</USERNAME>
<USEREMAIL>09pbt815@gmail.com</USEREMAIL>
<URI>http://www.matrixscience.com/cgi/master_results.pl?file=../data/20180922/FTmumeuTL.dat</URI>
<FILENAME />
<FORMAT />
<SEARCH>PMF</SEARCH>
<MascotVer>2.6.2.1</MascotVer>
<DB>SwissProt</DB>
<FastaVer>SwissProt_2018_08.fasta</FastaVer>
<NumSeqs>558125</NumSeqs>
<NumResidues>200328830</NumResidues>
<NumSeqsAfterTax>39603</NumSeqsAfterTax>
<NumQueries>50</NumQueries>
</header>
<fixed_mods>
<modification identifier="1">
<name>Carbamidomethyl (C)</name>
<delta>57.021464</delta>
</modification>
</fixed_mods>
<variable_mods>
<modification identifier="1">
<name>Oxidation (M)</name>
<delta>15.994915</delta>
<neutral_loss identifier="1">0</neutral_loss>
<neutral_loss identifier="2">63.998285</neutral_loss>
</modification>
</variable_mods>
<search_parameters>
<TAXONOMY>. . . . Viridiplantae (Green Plants)</TAXONOMY>
<CLE>Trypsin</CLE>
<PFA>1</PFA>
<MODS>Carbamidomethyl (C)</MODS>
<IT_MODS>Oxidation (M)</IT_MODS>
<TOL>190</TOL>
<TOLU>ppm</TOLU>
<CHARGE>1+</CHARGE>
<MASS>Monoisotopic</MASS>
</search_parameters>
<format_parameters>
<sigthreshold>0.05</sigthreshold>
<REPORT>0</REPORT>
<show_same_sets>0</show_same_sets>
<showsubsets>0</showsubsets>
<show_pep_dupes>1</show_pep_dupes>
</format_parameters>
<hits>
<hit number="1">
<protein accession="RH52A_ORYSJ">
<prot_desc>DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0602400 PE=2 SV=2</prot_desc>
<prot_score>47</prot_score>
<prot_thresh>58</prot_thresh>
<prot_expect>0.87</prot_expect>
<prot_mass>63140</prot_mass>
<prot_matches>8</prot_matches>
<peptide query="7">
<pep_exp_mz>672.5310</pep_exp_mz>
<pep_exp_mr>671.5237</pep_exp_mr>
<pep_calc_mr>671.3966</pep_calc_mr>
<pep_delta>0.1271</pep_delta>
<pep_start>2</pep_start>
<pep_end>9</pep_end>
<pep_miss>0</pep_miss>
<pep_res_before>M</pep_res_before>
<pep_seq>AAAAAVAK</pep_seq>
<pep_res_after>S</pep_res_after>
<pep_var_mod />
<pep_var_mod_pos />
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
<peptide query="13">
<pep_exp_mz>877.5780</pep_exp_mz>
<pep_exp_mr>876.5707</pep_exp_mr>
<pep_calc_mr>876.4375</pep_calc_mr>
<pep_delta>0.1332</pep_delta>
<pep_start>229</pep_start>
<pep_end>235</pep_end>
<pep_miss>0</pep_miss>
<pep_res_before>R</pep_res_before>
<pep_seq>LVDMVER</pep_seq>
<pep_res_after>S</pep_res_after>
<pep_var_mod>Oxidation (M)</pep_var_mod>
<pep_var_mod_pos>0.0001000.0</pep_var_mod_pos>
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
<peptide query="35">
<pep_exp_mz>1783.9960</pep_exp_mz>
<pep_exp_mr>1782.9887</pep_exp_mr>
<pep_calc_mr>1782.8761</pep_calc_mr>
<pep_delta>0.1126</pep_delta>
<pep_start>375</pep_start>
<pep_end>390</pep_end>
<pep_miss>1</pep_miss>
<pep_res_before>K</pep_res_before>
<pep_seq>GFPATAIHGDRTQQER</pep_seq>
<pep_res_after>E</pep_res_after>
<pep_var_mod />
<pep_var_mod_pos />
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
<peptide query="36">
<pep_exp_mz>1815.9950</pep_exp_mz>
<pep_exp_mr>1814.9877</pep_exp_mr>
<pep_calc_mr>1814.9567</pep_calc_mr>
<pep_delta>0.0310</pep_delta>
<pep_start>294</pep_start>
<pep_end>309</pep_end>
<pep_miss>0</pep_miss>
<pep_res_before>R</pep_res_before>
<pep_seq>LASDFLSNYIFITVGR</pep_seq>
<pep_res_after>V</pep_res_after>
<pep_var_mod />
<pep_var_mod_pos />
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
<peptide query="40">
<pep_exp_mz>3392.9580</pep_exp_mz>
<pep_exp_mr>3391.9507</pep_exp_mr>
<pep_calc_mr>3391.7810</pep_calc_mr>
<pep_delta>0.1697</pep_delta>
<pep_start>399</pep_start>
<pep_end>430</pep_end>
<pep_miss>1</pep_miss>
<pep_res_before>K</pep_res_before>
<pep_seq>TGLTPIMVATDVASRGLDVPNVAHVINYDLPK</pep_seq>
<pep_res_after>S</pep_res_after>
<pep_var_mod>Oxidation (M)</pep_var_mod>
<pep_var_mod_pos>0.00000010000000000000000000000000.0</pep_var_mod_pos>
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
<peptide query="42">
<pep_exp_mz>3433.0450</pep_exp_mz>
<pep_exp_mr>3432.0377</pep_exp_mr>
<pep_calc_mr>3431.6748</pep_calc_mr>
<pep_delta>0.3629</pep_delta>
<pep_start>123</pep_start>
<pep_end>157</pep_end>
<pep_miss>1</pep_miss>
<pep_res_before>R</pep_res_before>
<pep_seq>DLMACAQTGSGKTAAFCLPVVSGLVAAGGSGIGHR</pep_seq>
<pep_res_after>E</pep_res_after>
<pep_var_mod>Oxidation (M)</pep_var_mod>
<pep_var_mod_pos>0.00100000000000000000000000000000000.0</pep_var_mod_pos>
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
<peptide query="46">
<pep_exp_mz>3450.4990</pep_exp_mz>
<pep_exp_mr>3449.4917</pep_exp_mr>
<pep_calc_mr>3449.4027</pep_calc_mr>
<pep_delta>0.0890</pep_delta>
<pep_start>516</pep_start>
<pep_end>558</pep_end>
<pep_miss>1</pep_miss>
<pep_res_before>R</pep_res_before>
<pep_seq>QGSGGGYSGGGGGGGYSGGGGGGGYSGGGGGYSGGGRGGGYSR</pep_seq>
<pep_res_after>G</pep_res_after>
<pep_var_mod />
<pep_var_mod_pos />
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
<peptide query="49">
<pep_exp_mz>3468.4150</pep_exp_mz>
<pep_exp_mr>3467.4077</pep_exp_mr>
<pep_calc_mr>3466.7508</pep_calc_mr>
<pep_delta>0.6569</pep_delta>
<pep_start>65</pep_start>
<pep_end>97</pep_end>
<pep_miss>1</pep_miss>
<pep_res_before>R</pep_res_before>
<pep_seq>LDKYDIPVEVSGEDVPPPADGFEAAGLVEAVLR</pep_seq>
<pep_res_after>N</pep_res_after>
<pep_var_mod />
<pep_var_mod_pos />
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
</protein>
</hit>
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