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<header>
<COM>K1_12h_81</COM>
<Date>2017-07-27T05:45:49Z</Date>
<USERNAME>Kamaladevi</USERNAME>
<USEREMAIL>kamaladeviam@gmail.com</USEREMAIL>
<URI>http://www.matrixscience.com/cgi/master_results.pl?file=../data/20170727/FTieorTnO.dat</URI>
<FILENAME />
<FORMAT />
<SEARCH>PMF</SEARCH>
<MascotVer>2.6.0.242</MascotVer>
<DB>SwissProt</DB>
<FastaVer>SwissProt_2017_07.fasta</FastaVer>
<NumSeqs>555100</NumSeqs>
<NumResidues>198754198</NumResidues>
<NumSeqsAfterTax>3924</NumSeqsAfterTax>
<NumQueries>12</NumQueries>
</header>
<fixed_mods>
<modification identifier="1">
<name>Carbamidomethyl (C)</name>
<delta>57.021464</delta>
</modification>
</fixed_mods>
<variable_mods>
<modification identifier="1">
<name>Oxidation (M)</name>
<delta>15.994915</delta>
<neutral_loss identifier="1">0</neutral_loss>
<neutral_loss identifier="2">63.998285</neutral_loss>
</modification>
</variable_mods>
<search_parameters>
<TAXONOMY>. . . . . . Caenorhabditis elegans</TAXONOMY>
<CLE>Trypsin</CLE>
<PFA>1</PFA>
<MODS>Carbamidomethyl (C)</MODS>
<IT_MODS>Oxidation (M)</IT_MODS>
<TOL>1.2</TOL>
<TOLU>Da</TOLU>
<CHARGE>1+</CHARGE>
<MASS>Monoisotopic</MASS>
</search_parameters>
<format_parameters>
<sigthreshold>0.05</sigthreshold>
<REPORT>0</REPORT>
<show_same_sets>0</show_same_sets>
<showsubsets>0</showsubsets>
<show_pep_dupes>1</show_pep_dupes>
</format_parameters>
<hits>
<hit number="1">
<protein accession="RENT1_CAEEL">
<prot_desc>Regulator of nonsense transcripts 1 OS=Caenorhabditis elegans GN=smg-2 PE=1 SV=1</prot_desc>
<prot_score>63</prot_score>
<prot_thresh>48</prot_thresh>
<prot_expect>0.0018</prot_expect>
<prot_mass>121142</prot_mass>
<prot_matches>12</prot_matches>
<peptide query="1">
<pep_exp_mz>619.9200</pep_exp_mz>
<pep_exp_mr>618.9127</pep_exp_mr>
<pep_calc_mr>619.3806</pep_calc_mr>
<pep_delta>-0.4678</pep_delta>
<pep_start>905</pep_start>
<pep_end>909</pep_end>
<pep_miss>1</pep_miss>
<pep_res_before>R</pep_res_before>
<pep_seq>FGIKR</pep_seq>
<pep_res_after>M</pep_res_after>
<pep_var_mod />
<pep_var_mod_pos />
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
<peptide query="2">
<pep_exp_mz>632.0700</pep_exp_mz>
<pep_exp_mr>631.0627</pep_exp_mr>
<pep_calc_mr>630.3198</pep_calc_mr>
<pep_delta>0.7430</pep_delta>
<pep_start>974</pep_start>
<pep_end>978</pep_end>
<pep_miss>1</pep_miss>
<pep_res_before>R</pep_res_before>
<pep_seq>RGDQR</pep_seq>
<pep_res_after>R</pep_res_after>
<pep_var_mod />
<pep_var_mod_pos />
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
<peptide query="3">
<pep_exp_mz>689.2000</pep_exp_mz>
<pep_exp_mr>688.1927</pep_exp_mr>
<pep_calc_mr>688.4232</pep_calc_mr>
<pep_delta>-0.2304</pep_delta>
<pep_start>890</pep_start>
<pep_end>895</pep_end>
<pep_miss>1</pep_miss>
<pep_res_before>K</pep_res_before>
<pep_seq>ATIRTK</pep_seq>
<pep_res_after>N</pep_res_after>
<pep_var_mod />
<pep_var_mod_pos />
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
<peptide query="4">
<pep_exp_mz>722.8500</pep_exp_mz>
<pep_exp_mr>721.8427</pep_exp_mr>
<pep_calc_mr>722.3473</pep_calc_mr>
<pep_delta>-0.5046</pep_delta>
<pep_start>1036</pep_start>
<pep_end>1040</pep_end>
<pep_miss>0</pep_miss>
<pep_res_before>R</pep_res_before>
<pep_seq>HHHHR</pep_seq>
<pep_res_after>Q</pep_res_after>
<pep_var_mod />
<pep_var_mod_pos />
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
<peptide query="5">
<pep_exp_mz>723.8800</pep_exp_mz>
<pep_exp_mr>722.8727</pep_exp_mr>
<pep_calc_mr>723.3221</pep_calc_mr>
<pep_delta>-0.4494</pep_delta>
<pep_start>376</pep_start>
<pep_end>381</pep_end>
<pep_miss>0</pep_miss>
<pep_res_before>K</pep_res_before>
<pep_seq>SVMESR</pep_seq>
<pep_res_after>I</pep_res_after>
<pep_var_mod>Oxidation (M)</pep_var_mod>
<pep_var_mod_pos>0.001000.0</pep_var_mod_pos>
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
<peptide query="6">
<pep_exp_mz>785.9800</pep_exp_mz>
<pep_exp_mr>784.9727</pep_exp_mr>
<pep_calc_mr>785.4759</pep_calc_mr>
<pep_delta>-0.5032</pep_delta>
<pep_start>833</pep_start>
<pep_end>839</pep_end>
<pep_miss>0</pep_miss>
<pep_res_before>R</pep_res_before>
<pep_seq>LNVAITR</pep_seq>
<pep_res_after>A</pep_res_after>
<pep_var_mod />
<pep_var_mod_pos />
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
<peptide query="7">
<pep_exp_mz>802.9300</pep_exp_mz>
<pep_exp_mr>801.9227</pep_exp_mr>
<pep_calc_mr>802.4450</pep_calc_mr>
<pep_delta>-0.5222</pep_delta>
<pep_start>432</pep_start>
<pep_end>437</pep_end>
<pep_miss>1</pep_miss>
<pep_res_before>K</pep_res_before>
<pep_seq>FDLPRR</pep_seq>
<pep_res_after>L</pep_res_after>
<pep_var_mod />
<pep_var_mod_pos />
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
<peptide query="8">
<pep_exp_mz>803.9700</pep_exp_mz>
<pep_exp_mr>802.9627</pep_exp_mr>
<pep_calc_mr>802.4450</pep_calc_mr>
<pep_delta>0.5178</pep_delta>
<pep_start>432</pep_start>
<pep_end>437</pep_end>
<pep_miss>1</pep_miss>
<pep_res_before>K</pep_res_before>
<pep_seq>FDLPRR</pep_seq>
<pep_res_after>L</pep_res_after>
<pep_var_mod />
<pep_var_mod_pos />
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
<peptide query="9">
<pep_exp_mz>1229.8600</pep_exp_mz>
<pep_exp_mr>1228.8527</pep_exp_mr>
<pep_calc_mr>1228.6962</pep_calc_mr>
<pep_delta>0.1565</pep_delta>
<pep_start>173</pep_start>
<pep_end>182</pep_end>
<pep_miss>1</pep_miss>
<pep_res_before>K</pep_res_before>
<pep_seq>KDQVVVIICR</pep_seq>
<pep_res_after>T</pep_res_after>
<pep_var_mod />
<pep_var_mod_pos />
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
<peptide query="10">
<pep_exp_mz>1230.9000</pep_exp_mz>
<pep_exp_mr>1229.8927</pep_exp_mr>
<pep_calc_mr>1228.6962</pep_calc_mr>
<pep_delta>1.1965</pep_delta>
<pep_start>173</pep_start>
<pep_end>182</pep_end>
<pep_miss>1</pep_miss>
<pep_res_before>K</pep_res_before>
<pep_seq>KDQVVVIICR</pep_seq>
<pep_res_after>T</pep_res_after>
<pep_var_mod />
<pep_var_mod_pos />
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
<peptide query="11">
<pep_exp_mz>1231.9100</pep_exp_mz>
<pep_exp_mr>1230.9027</pep_exp_mr>
<pep_calc_mr>1231.4299</pep_calc_mr>
<pep_delta>-0.5272</pep_delta>
<pep_start>1</pep_start>
<pep_end>10</pep_end>
<pep_miss>0</pep_miss>
<pep_res_before>-</pep_res_before>
<pep_seq>MDDSDDEYSR</pep_seq>
<pep_res_after>S</pep_res_after>
<pep_var_mod />
<pep_var_mod_pos />
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
<peptide query="12">
<pep_exp_mz>1232.9500</pep_exp_mz>
<pep_exp_mr>1231.9427</pep_exp_mr>
<pep_calc_mr>1231.7288</pep_calc_mr>
<pep_delta>0.2139</pep_delta>
<pep_start>840</pep_start>
<pep_end>851</pep_end>
<pep_miss>1</pep_miss>
<pep_res_before>R</pep_res_before>
<pep_seq>AKYGLVLVGNAK</pep_seq>
<pep_res_after>V</pep_res_after>
<pep_var_mod />
<pep_var_mod_pos />
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
</protein>
</hit>
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