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<header>
<COM>A12_24h_293</COM>
<Date>2017-07-27T09:25:23Z</Date>
<USERNAME>Kamaladevi</USERNAME>
<USEREMAIL>kamaladeviam@gmail.com</USEREMAIL>
<URI>http://www.matrixscience.com/cgi/master_results.pl?file=../data/20170727/FTieoaaSR.dat</URI>
<FILENAME />
<FORMAT />
<SEARCH>PMF</SEARCH>
<MascotVer>2.6.0.242</MascotVer>
<DB>SwissProt</DB>
<FastaVer>SwissProt_2017_07.fasta</FastaVer>
<NumSeqs>555100</NumSeqs>
<NumResidues>198754198</NumResidues>
<NumSeqsAfterTax>3924</NumSeqsAfterTax>
<NumQueries>7</NumQueries>
</header>
<fixed_mods>
<modification identifier="1">
<name>Carbamidomethyl (C)</name>
<delta>57.021464</delta>
</modification>
</fixed_mods>
<variable_mods>
<modification identifier="1">
<name>Oxidation (M)</name>
<delta>15.994915</delta>
<neutral_loss identifier="1">0</neutral_loss>
<neutral_loss identifier="2">63.998285</neutral_loss>
</modification>
</variable_mods>
<search_parameters>
<TAXONOMY>. . . . . . Caenorhabditis elegans</TAXONOMY>
<CLE>Trypsin</CLE>
<PFA>1</PFA>
<MODS>Carbamidomethyl (C)</MODS>
<IT_MODS>Oxidation (M)</IT_MODS>
<TOL>1.2</TOL>
<TOLU>Da</TOLU>
<CHARGE>1+</CHARGE>
<MASS>Monoisotopic</MASS>
</search_parameters>
<format_parameters>
<sigthreshold>0.05</sigthreshold>
<REPORT>0</REPORT>
<show_same_sets>0</show_same_sets>
<showsubsets>0</showsubsets>
<show_pep_dupes>1</show_pep_dupes>
</format_parameters>
<hits>
<hit number="1">
<protein accession="NHR28_CAEEL">
<prot_desc>Nuclear hormone receptor family member nhr-28 OS=Caenorhabditis elegans GN=nhr-28 PE=2 SV=3</prot_desc>
<prot_score>56</prot_score>
<prot_thresh>48</prot_thresh>
<prot_expect>0.0096</prot_expect>
<prot_mass>51412</prot_mass>
<prot_matches>7</prot_matches>
<peptide query="1">
<pep_exp_mz>786.4900</pep_exp_mz>
<pep_exp_mr>785.4827</pep_exp_mr>
<pep_calc_mr>786.4712</pep_calc_mr>
<pep_delta>-0.9884</pep_delta>
<pep_start>34</pep_start>
<pep_end>40</pep_end>
<pep_miss>1</pep_miss>
<pep_res_before>R</pep_res_before>
<pep_seq>RSVALNK</pep_seq>
<pep_res_after>A</pep_res_after>
<pep_var_mod />
<pep_var_mod_pos />
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
<peptide query="2">
<pep_exp_mz>842.4300</pep_exp_mz>
<pep_exp_mr>841.4227</pep_exp_mr>
<pep_calc_mr>841.3905</pep_calc_mr>
<pep_delta>0.0322</pep_delta>
<pep_start>27</pep_start>
<pep_end>33</pep_end>
<pep_miss>0</pep_miss>
<pep_res_before>R</pep_res_before>
<pep_seq>ACAAFFR</pep_seq>
<pep_res_after>R</pep_res_after>
<pep_var_mod />
<pep_var_mod_pos />
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
<peptide query="3">
<pep_exp_mz>843.4500</pep_exp_mz>
<pep_exp_mr>842.4427</pep_exp_mr>
<pep_calc_mr>843.4273</pep_calc_mr>
<pep_delta>-0.9845</pep_delta>
<pep_start>266</pep_start>
<pep_end>272</pep_end>
<pep_miss>0</pep_miss>
<pep_res_before>R</pep_res_before>
<pep_seq>NVLDPMR</pep_seq>
<pep_res_after>R</pep_res_after>
<pep_var_mod />
<pep_var_mod_pos />
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
<peptide query="4">
<pep_exp_mz>1775.9500</pep_exp_mz>
<pep_exp_mr>1774.9427</pep_exp_mr>
<pep_calc_mr>1775.1145</pep_calc_mr>
<pep_delta>-0.1718</pep_delta>
<pep_start>333</pep_start>
<pep_end>348</pep_end>
<pep_miss>1</pep_miss>
<pep_res_before>R</pep_res_before>
<pep_seq>LANLLVLLPALQRSVR</pep_seq>
<pep_res_after>R</pep_res_after>
<pep_var_mod />
<pep_var_mod_pos />
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
<peptide query="5">
<pep_exp_mz>1776.9700</pep_exp_mz>
<pep_exp_mr>1775.9627</pep_exp_mr>
<pep_calc_mr>1775.8478</pep_calc_mr>
<pep_delta>0.1149</pep_delta>
<pep_start>180</pep_start>
<pep_end>193</pep_end>
<pep_miss>1</pep_miss>
<pep_res_before>K</pep_res_before>
<pep_seq>SYPDFEQLHQEQKK</pep_seq>
<pep_res_after>L</pep_res_after>
<pep_var_mod />
<pep_var_mod_pos />
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
<peptide query="6">
<pep_exp_mz>1777.9800</pep_exp_mz>
<pep_exp_mr>1776.9727</pep_exp_mr>
<pep_calc_mr>1775.8478</pep_calc_mr>
<pep_delta>1.1249</pep_delta>
<pep_start>180</pep_start>
<pep_end>193</pep_end>
<pep_miss>1</pep_miss>
<pep_res_before>K</pep_res_before>
<pep_seq>SYPDFEQLHQEQKK</pep_seq>
<pep_res_after>L</pep_res_after>
<pep_var_mod />
<pep_var_mod_pos />
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
<peptide query="7">
<pep_exp_mz>1789.9400</pep_exp_mz>
<pep_exp_mr>1788.9327</pep_exp_mr>
<pep_calc_mr>1787.9305</pep_calc_mr>
<pep_delta>1.0022</pep_delta>
<pep_start>396</pep_start>
<pep_end>410</pep_end>
<pep_miss>1</pep_miss>
<pep_res_before>K</pep_res_before>
<pep_seq>VIKTEEIDSVWDLNK</pep_seq>
<pep_res_after>G</pep_res_after>
<pep_var_mod />
<pep_var_mod_pos />
<pep_summed_mod_pos />
<pep_local_mod_pos />
</peptide>
</protein>
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