Study Info
INDA Accessions: INRP000373
INSDC Accessions: PRJEB94396, ERP177268
- Title: Exploring Viral Co-infections and Microbiome in the Upper Respiratory tract of SARS-CoV2 patients
- Data Type : Other
- Descriptive Title: SARS-COV2 infections alters the upper respiratory tract microbiome, potentially contributing to disease severity through microbial dysbiosis and viral co-infections. In this study Nasal and oral swaps were collected from SARS-COV2 positive patients and Control (RT-PCR Negative) patients. Targeted viral enrichment and next generation Sequencing was performed. This study reveal dynamic alteration in the upper respiratory tract virome and microbiome associated with SARS-COV2 disease severity.
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Organism:
Scientific Name(Taxon Id): human nasopharyngeal metagenome (1131769) Common Name:
Other Info
- Abstract: SARS-COV2 infections alters the upper respiratory tract microbiome, potentially contributing to disease severity through microbial dysbiosis and viral co-infections. In this study Nasal and oral swaps were collected from SARS-COV2 positive patients and Control (RT-PCR Negative) patients. Targeted viral enrichment and next generation Sequencing was performed. This study reveal dynamic alteration in the upper respiratory tract virome and microbiome associated with SARS-COV2 disease severity.
- Linked publications:
- Center Name: Bhabatosh Das, Centre of Microbial Research, Translational Health Science and Technology Institute
- Number of Base(Total) Mbp: 15,590,801,988
- Size in bytes(Total): 12,367,525,450
- Number of sample:
- Number of Runs:
- Number of Sequences:
- Number of Assembly:
- Number of Variant files:
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