Study Info
INDA Accessions: INRP000104
INSDC Accessions: PRJEB88891, ERP171947
- Title: Whole Genome Sequencing of Lambs-Ovis aries, kids-Capra hircus, Lactating goats -Capra hircus, Heifers -Bos taurus
- Data Type : Whole Genome Sequencing
- Descriptive Title: This study explores the versatile applications of culturable facultative anaerobic bacteria from the unique rumen ecosystem of lambs, kids, lactating goats and heifers. Utilizing a whole genome sequencing approach, the research seeks for isolating facultative ruminal bacteria, delving into their genetic capabilities for biotechnological advancements and establishing a comprehensive database containing their full length CAZymes, facilitating their potential industrial and medical utilization.
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Organism:
Scientific Name(Taxon Id): Aeromonas veronii (654) Common Name:
Scientific Name(Taxon Id): Alkalihalobacillus clausii (79880) Common Name:
Scientific Name(Taxon Id): Bacillus altitudinis (293387) Common Name:
Scientific Name(Taxon Id): Bacillus infantis (324767) Common Name:
Scientific Name(Taxon Id): Bacillus licheniformis (1402) Common Name:
Scientific Name(Taxon Id): Bacillus paralicheniformis (1648923) Common Name:
Scientific Name(Taxon Id): Bacillus safensis (561879) Common Name:
Scientific Name(Taxon Id): Bacillus spizizenii (96241) Common Name:
Scientific Name(Taxon Id): Bacillus subtilis (1423) Common Name:
Scientific Name(Taxon Id): Citrobacter portucalensis (1639133) Common Name:
Scientific Name(Taxon Id): Corynebacterium callunae (1721) Common Name:
Scientific Name(Taxon Id): Enterococcus faecalis (1351) Common Name:
Scientific Name(Taxon Id): Enterococcus faecium (1352) Common Name:
Scientific Name(Taxon Id): Enterococcus hirae (1354) Common Name:
Scientific Name(Taxon Id): Enterococcus lactis (357441) Common Name:
Scientific Name(Taxon Id): Enterococcus mundtii (53346) Common Name:
Scientific Name(Taxon Id): Escherichia coli (562) Common Name:
Scientific Name(Taxon Id): Exiguobacterium indicum (296995) Common Name:
Scientific Name(Taxon Id): Klebsiella pasteurii (2587529) Common Name:
Scientific Name(Taxon Id): Kurthia gibsonii (33946) Common Name:
Scientific Name(Taxon Id): Lactococcus garvieae (1363) Common Name:
Scientific Name(Taxon Id): Lactococcus lactis (1358) Common Name:
Scientific Name(Taxon Id): Lysinibacillus halotolerans (1368476) Common Name:
Scientific Name(Taxon Id): Lysinibacillus telephonicus (1714840) Common Name:
Scientific Name(Taxon Id): Neobacillus niacini (86668) Common Name:
Scientific Name(Taxon Id): Niallia circulans (1397) Common Name:
Scientific Name(Taxon Id): Niallia taxi (2499688) Common Name:
Scientific Name(Taxon Id): Pediococcus pentosaceus (1255) Common Name:
Scientific Name(Taxon Id): Priestia aryabhattai (412384) Common Name:
Scientific Name(Taxon Id): Priestia filamentosa (1402861) Common Name:
Scientific Name(Taxon Id): Puerhibacterium sp. TATVAM-FAB25 (3093699) Common Name:
Scientific Name(Taxon Id): Serratia marcescens (615) Common Name:
Scientific Name(Taxon Id): Staphylococcus hominis (1290) Common Name:
Scientific Name(Taxon Id): Streptococcus ruminicola (2686210) Common Name:
Scientific Name(Taxon Id): Streptococcus sp. (1306) Common Name:
Scientific Name(Taxon Id): Terribacillus halophilus (361279) Common Name:
Scientific Name(Taxon Id): Terribacillus saccharophilus (361277) Common Name:
Scientific Name(Taxon Id): Weissella cibaria (137591) Common Name:
Scientific Name(Taxon Id): Weissella paramesenteroides (1249) Common Name:
Other Info
- Abstract: This study explores the versatile applications of culturable facultative anaerobic bacteria from the unique rumen ecosystem of lambs, kids, lactating goats and heifers. Utilizing a whole genome sequencing approach, the research seeks for isolating facultative ruminal bacteria, delving into their genetic capabilities for biotechnological advancements and establishing a comprehensive database containing their full length CAZymes, facilitating their potential industrial and medical utilization.
- Linked publications:
- Center Name: Gujarat Biotechnology Research Centre
- Number of Base(Total) Mbp: 91,399,906,976
- Size in bytes(Total): 51,503,853,118
- Number of sample:
- Number of Runs:
- Number of Sequences:
- Number of Assembly:
- Number of Variant files:
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