MS Study

Project uploaded by: Pannaga Pavan
Project ID: IMP_100061
Title: Temporal and Nutritional Mapping of Carbon Partitioning in Chromochloris zofingiensis Using Multi-Dimensional Untargeted Metabolomics
Project Description: Background: Microalgal biorefineries offer a sustainable framework for carbon sequestration and the concurrent synthesis of high-value bioproducts, such as triacylglycerols (lipids) and the potent antioxidant astaxanthin. However, a fundamental biological trade-off frequently constrains commercial viability: the metabolic shift from primary biomass accumulation to stress-induced secondary metabolite production. In the green microalga Chromochloris zofingiensis, researchers still do not fully understand the precise regulatory mechanisms and carbon partitioning flows that govern this transition. Resolving this metabolic plasticity is crucial for identifying genetic or process-based targets to optimize bioproduct yields without compromising biomass productivity. Objectives: This study aims to delineate the temporal metabolic flexibility and resolve the intricate carbon partitioning networks in C. zofingiensis under variable nutritional constraints. The specific objectives are to: •Evaluate Temporal Nutritional Responses: Investigate the metabolic profile of C. zofingiensis across a factorial matrix of three nitrogen regimes—replete (NR), limiting (NL), and deficient (ND)—supplemented with 6% CO₂, subjected to time-course (0, 3, 6, and 9 days) based experimentation. •Deploy a High-Resolution Metabolomics Platform: Utilize a comprehensive, untargeted liquid chromatography-mass spectrometry (LC-MS) approach featuring dual-column chemistry (reverse-phase C18 and hydrophilic interaction liquid chromatography [HILIC]) combined with dual-polarity (±) electrospray ionization to maximize metabolome coverage. •Elucidate Regulatory Nodes: Identify critical metabolic checkpoints, switch points, and regulatory bottlenecks that control the redirection of carbon flux from primary growth pathways toward stress-induced lipid and astaxanthin biosynthesis. Main Achievements and Significance: This research successfully establishes a comprehensive, high-resolution multi-dimensional dataset mapping the temporal and nutritional regulatory networks of C. zofingiensis. The primary achievement is the precise identification of metabolic switchpoints that dictate carbon redirection under nitrogen stress. By defining these regulatory nodes, this work provides actionable metabolic engineering targets and culture strategies to decouple biomass accumulation from secondary metabolite synthesis, ultimately enhancing the economic viability of microalgal biorefineries and global carbon capture efficiencies.
Research Area: Biological Sciences
Funding Source: Department of Biotechnology (DBT)
Project Contributors: Pannaga Pavan Jutur

Study uploaded by: Pannaga Pavan
Study ID: IMS_100059
Title: Temporal Metabolic Plasticity of Chromochloris zofingiensis under Variable Nitrogen and CO₂ Conditions
Summary: This study employs an untargeted liquid chromatography-mass spectrometry (LC-MS)-based metabolomics platform to elucidate the metabolic plasticity and carbon partitioning dynamics of the oleaginous microalga Chromochloris zofingiensis. Utilizing a comprehensive factorial experimental design, cultures were evaluated under three distinct nitrogen regimes—replete (NR), limited (NL), and deficient (ND)—in combination with varying levels of carbon supplementation. To capture the kinetic shifts in the metabolome, temporal sampling was conducted at days 3, 6, and 9. High-resolution chemical profiling was achieved through an orthogonal analytical approach leveraging dual-column chromatography (reversed-phase C18 and hydrophilic interaction liquid chromatography [HILIC]) operated in both positive and negative electrospray ionization modes (±ESI). This multidimensional dataset aims to resolve the intricate metabolic flux balancing vegetative biomass accumulation against the stress-induced biosynthesis of high-value bioproducts, specifically triacylglycerols and astaxanthin. Ultimately, this work delineates critical metabolic checkpoints and regulatory nodes governing carbon allocation, offering pivotal insights for the metabolic engineering of microalgal biorefineries and the optimization of sustainable carbon sequestration strategies.
Publication:
Release Date: July 2, 2026
Study Type: Mass Spectrometry (MS)
Data Type: Untargeted
IEC/IBSC Approval Number :

Sr.No Sample ID Sample Name Organism Source Sample Preparation Protocol Sample Type Experimental Condition Time of treatment Variant/Variety Gender Age Replicates Storage Conditions Extraction Protocol Number of files per sample
1 IMSM_104217 3ND_1 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete | Column: Hilic Day 3 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY4NN).

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2 IMSM_104218 3ND_1c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete with CO2 | Column: Hilic Day 3 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY5NN).

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3 IMSM_104219 3ND_1c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete with CO2 | Column: C18 Day 3 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY6NN).

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4 IMSM_104220 3ND_1_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete | Column: C18 Day 3 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY7NN).

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5 IMSM_104221 3ND_2 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete | Column: Hilic Day 3 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY8NN).

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6 IMSM_104222 3ND_2c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete with CO2 | Column: Hilic Day 3 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY9NN).

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7 IMSM_104223 3ND_2c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete with CO2 | Column: C18 Day 3 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY10NN).

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8 IMSM_104224 3ND_2_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete | Column: C18 Day 3 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY11NN).

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9 IMSM_104225 3ND_3 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete | Column: Hilic Day 3 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY12NN).

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10 IMSM_104226 3ND_3c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete with CO2 | Column: Hilic Day 3 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY13NN).

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11 IMSM_104227 3ND_3c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete with CO2 | Column: C18 Day 3 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY14NN).

1
12 IMSM_104228 3ND_3_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete | Column: C18 Day 3 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY15NN).

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13 IMSM_104229 3NL_1 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited | Column: Hilic Day 3 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY16NN).

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14 IMSM_104230 3NL_1c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited with CO2 | Column: Hilic Day 3 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY17NN).

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15 IMSM_104231 3NL_1c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited with CO2 | Column: C18 Day 3 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY18NN).

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16 IMSM_104232 3NL_1_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited | Column: C18 Day 3 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY19NN).

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17 IMSM_104233 3NL_2 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited | Column: Hilic Day 3 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY20NN).

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18 IMSM_104234 3NL_2c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited with CO2 | Column: Hilic Day 3 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY21NN).

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19 IMSM_104235 3NL_2c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited with CO2 | Column: C18 Day 3 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY22NN).

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20 IMSM_104236 3NL_2_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited | Column: C18 Day 3 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY23NN).

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21 IMSM_104237 3NL_3 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited | Column: Hilic Day 3 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY24NN).

1
22 IMSM_104238 3NL_3c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited with CO2 | Column: Hilic Day 3 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY25NN).

1
23 IMSM_104239 3NL_3c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited with CO2 | Column: C18 Day 3 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY26NN).

1
24 IMSM_104240 3NL_3_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited | Column: C18 Day 3 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY27NN).

1
25 IMSM_104241 3NR_1 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete | Column: Hilic Day 3 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY28NN).

1
26 IMSM_104242 3NR_1c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete with CO2 | Column: Hilic Day 3 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY29NN).

1
27 IMSM_104243 3NR_1c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete with CO2 | Column: C18 Day 3 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY30NN).

1
28 IMSM_104244 3NR_1_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete | Column: C18 Day 3 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY31NN).

1
29 IMSM_104245 3NR_2 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete | Column: Hilic Day 3 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY32NN).

1
30 IMSM_104246 3NR_2c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete with CO2 | Column: Hilic Day 3 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY33NN).

1
31 IMSM_104247 3NR_2c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete with CO2 | Column: C18 Day 3 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY34NN).

1
32 IMSM_104248 3NR_2_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete | Column: C18 Day 3 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY35NN).

1
33 IMSM_104249 3NR_3 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete | Column: Hilic Day 3 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY36NN).

1
34 IMSM_104250 3NR_3c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete with CO2 | Column: Hilic Day 3 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY37NN).

1
35 IMSM_104251 3NR_3c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete with CO2 | Column: C18 Day 3 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY38NN).

1
36 IMSM_104252 3NR_3_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete | Column: C18 Day 3 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY39NN).

1
37 IMSM_104253 6ND_1 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete | Column: Hilic Day 6 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY40NN).

1
38 IMSM_104254 6ND_1c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete with CO2 | Column: Hilic Day 6 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY41NN).

1
39 IMSM_104255 6ND_1c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete with CO2 | Column: C18 Day 6 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY42NN).

1
40 IMSM_104256 6ND_1_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete | Column: C18 Day 6 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY43NN).

1
41 IMSM_104257 6ND_2 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete | Column: Hilic Day 6 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY44NN).

1
42 IMSM_104258 6ND_2c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete with CO2 | Column: Hilic Day 6 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY45NN).

1
43 IMSM_104259 6ND_2c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete with CO2 | Column: C18 Day 6 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY46NN).

1
44 IMSM_104260 6ND_2_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete | Column: C18 Day 6 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY47NN).

1
45 IMSM_104261 6ND_3 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete | Column: Hilic Day 6 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY48NN).

1
46 IMSM_104262 6ND_3c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete with CO2 | Column: Hilic Day 6 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY49NN).

1
47 IMSM_104263 6ND_3c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete with CO2 | Column: C18 Day 6 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY50NN).

1
48 IMSM_104264 6ND_3_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete | Column: C18 Day 6 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY51NN).

1
49 IMSM_104265 6NL_1 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited | Column: Hilic Day 6 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY52NN).

1
50 IMSM_104266 6NL_1c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited with CO2 | Column: Hilic Day 6 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY53NN).

1
51 IMSM_104267 6NL_1c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited with CO2 | Column: C18 Day 6 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY54NN).

1
52 IMSM_104268 6NL_1_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited | Column: C18 Day 6 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY55NN).

1
53 IMSM_104269 6NL_2 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited | Column: Hilic Day 6 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY56NN).

1
54 IMSM_104270 6NL_2c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited with CO2 | Column: Hilic Day 6 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY57NN).

1
55 IMSM_104271 6NL_2c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited with CO2 | Column: C18 Day 6 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY58NN).

1
56 IMSM_104272 6NL_2_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited | Column: C18 Day 6 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY59NN).

1
57 IMSM_104273 6NL_3 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited | Column: Hilic Day 6 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY60NN).

1
58 IMSM_104274 6NL_3c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited with CO2 | Column: Hilic Day 6 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY61NN).

1
59 IMSM_104275 6NL_3c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited with CO2 | Column: C18 Day 6 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY62NN).

1
60 IMSM_104276 6NL_3_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited | Column: C18 Day 6 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY63NN).

1
61 IMSM_104277 6NR_1 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete | Column: Hilic Day 6 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY64NN).

1
62 IMSM_104278 6NR_1c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete with CO2 | Column: Hilic Day 6 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY65NN).

1
63 IMSM_104279 6NR_1c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete with CO2 | Column: C18 Day 6 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY66NN).

1
64 IMSM_104280 6NR_1_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete | Column: C18 Day 6 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY67NN).

1
65 IMSM_104281 6NR_2 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete | Column: Hilic Day 6 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY68NN).

1
66 IMSM_104282 6NR_2c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete with CO2 | Column: Hilic Day 6 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY69NN).

1
67 IMSM_104283 6NR_2c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete with CO2 | Column: C18 Day 6 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY70NN).

1
68 IMSM_104284 6NR_2_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete | Column: C18 Day 6 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY71NN).

1
69 IMSM_104285 6NR_3 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete | Column: Hilic Day 6 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY72NN).

1
70 IMSM_104286 6NR_3c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete with CO2 | Column: Hilic Day 6 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY73NN).

1
71 IMSM_104287 6NR_3c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete with CO2 | Column: C18 Day 6 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY74NN).

1
72 IMSM_104288 6NR_3_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete | Column: C18 Day 6 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY75NN).

1
73 IMSM_104289 9ND_1 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete | Column: Hilic Day 9 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY76NN).

1
74 IMSM_104290 9ND_1c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete with CO2 | Column: Hilic Day 9 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY77NN).

1
75 IMSM_104291 9ND_1c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete with CO2 | Column: C18 Day 9 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY78NN).

1
76 IMSM_104292 9ND_1_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete | Column: C18 Day 9 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY79NN).

1
77 IMSM_104293 9ND_2 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete | Column: Hilic Day 9 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY80NN).

1
78 IMSM_104294 9ND_2c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete with CO2 | Column: Hilic Day 9 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY81NN).

1
79 IMSM_104295 9ND_2c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete with CO2 | Column: C18 Day 9 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY82NN).

1
80 IMSM_104296 9ND_2_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete | Column: C18 Day 9 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY83NN).

1
81 IMSM_104297 9ND_3 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete | Column: Hilic Day 9 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY84NN).

1
82 IMSM_104298 9ND_3c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete with CO2 | Column: Hilic Day 9 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY85NN).

1
83 IMSM_104299 9ND_3c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete with CO2 | Column: C18 Day 9 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY86NN).

1
84 IMSM_104300 9ND_3_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen deplete | Column: C18 Day 9 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY87NN).

1
85 IMSM_104301 9NL_1 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited | Column: Hilic Day 9 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY88NN).

1
86 IMSM_104302 9NL_1c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited with CO2 | Column: Hilic Day 9 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY89NN).

1
87 IMSM_104303 9NL_1c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited with CO2 | Column: C18 Day 9 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY90NN).

1
88 IMSM_104304 9NL_1_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited | Column: C18 Day 9 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY91NN).

1
89 IMSM_104305 9NL_2 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited | Column: Hilic Day 9 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY92NN).

1
90 IMSM_104306 9NL_2c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited with CO2 | Column: Hilic Day 9 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY93NN).

1
91 IMSM_104307 9NL_2c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited with CO2 | Column: C18 Day 9 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY94NN).

1
92 IMSM_104308 9NL_2_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited | Column: C18 Day 9 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY95NN).

1
93 IMSM_104309 9NL_3 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited | Column: Hilic Day 9 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY96NN).

1
94 IMSM_104310 9NL_3c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited with CO2 | Column: Hilic Day 9 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY97NN).

1
95 IMSM_104311 9NL_3c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited with CO2 | Column: C18 Day 9 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY98NN).

1
96 IMSM_104312 9NL_3_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen limited | Column: C18 Day 9 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY99NN).

1
97 IMSM_104313 9NR_1 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete | Column: Hilic Day 9 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY100NN).

1
98 IMSM_104314 9NR_1c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete with CO2 | Column: Hilic Day 9 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY101NN).

1
99 IMSM_104315 9NR_1c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete with CO2 | Column: C18 Day 9 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY102NN).

1
100 IMSM_104316 9NR_1_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete | Column: C18 Day 9 Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY103NN).

1
101 IMSM_104317 9NR_2 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete | Column: Hilic Day 9 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY104NN).

1
102 IMSM_104318 9NR_2c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete with CO2 | Column: Hilic Day 9 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY105NN).

1
103 IMSM_104319 9NR_2c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete with CO2 | Column: C18 Day 9 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY106NN).

1
104 IMSM_104320 9NR_2_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete | Column: C18 Day 9 Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY107NN).

1
105 IMSM_104321 9NR_3 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete | Column: Hilic Day 9 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY108NN).

1
106 IMSM_104322 9NR_3c Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete with CO2 | Column: Hilic Day 9 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY109NN).

1
107 IMSM_104323 9NR_3c_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete with CO2 | Column: C18 Day 9 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY110NN).

1
108 IMSM_104324 9NR_3_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Media Treatment: Nitrogen replete | Column: C18 Day 9 Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY111NN).

1
109 IMSM_104325 BLANK1_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Blank Treatment: BLANK | Column: C18 NA Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY112NN).

1
110 IMSM_104326 BLANK1_H Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Blank Treatment: BLANK | Column: C18 NA Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY113NN).

1
111 IMSM_104327 BLANK2_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Blank Treatment: BLANK | Column: C18 NA Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY114NN).

1
112 IMSM_104328 BLANK2_H Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Blank Treatment: BLANK | Column: C18 NA Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY115NN).

1
113 IMSM_104329 BLANK3_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Blank Treatment: BLANK | Column: C18 NA Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY116NN).

1
114 IMSM_104330 BLANK3_H Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). Blank Treatment: BLANK | Column: C18 NA Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY117NN).

1
115 IMSM_104331 QC1_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). QC sample Treatment: QC1 | Column: C18 NA Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY118NN).

1
116 IMSM_104332 QC1_H Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). QC sample Treatment: QC1 | Column: Hilic NA Chromochloris zofingiensis NA NA 1 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY119NN).

1
117 IMSM_104333 QC2_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). QC sample Treatment: QC2 | Column: C18 NA Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY120NN).

1
118 IMSM_104334 QC2_H Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). QC sample Treatment: QC2 | Column: Hilic NA Chromochloris zofingiensis NA NA 2 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY121NN).

1
119 IMSM_104335 QC3_18 Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). QC sample Treatment: QC3 | Column: C18 NA Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY122NN).

1
120 IMSM_104336 QC3_H Chromochloris zofingiensis Lab culture Algal Strain and Pre-Cultivation Conditions: Chromochloris zofingiensis (strain UTEX 32) was obtained from the Culture Collection of Algae at the University of Texas at Austin (USA). Stock cultures were maintained axenically on solid Bold's Basal Medium (BBM) agar plates under phototrophic conditions, subjected to a light intensity of 150 μmol photons m⁻² s⁻¹ under a 16:8 h light/dark cycle at a controlled temperature of 22±2 °C. To prepare the experimental inoculum, single colonies were transferred from solid media into liquid BBM and cultivated until reaching the logarithmic growth phase. Experimental Design and Factorial Cultivation Regimes: Experimental cultures were initiated by inoculating logarithmic-phase cells into 500 mL Erlenmeyer flasks containing 200 mL of modified BBM working volume at an initial optical density (OD680 or OD750), specify wavelength if known) of 0.1. A factorial experimental matrix was established to evaluate the combined effects of nitrogen availability and carbon enrichment. The cultures were subjected to three distinct nitrogen regimes modulated via sodium nitrate (NaNO₃) concentration: Nitrogen Replete (NR): 0.25 g L⁻¹ NaNO₃; Nitrogen Limited (NL): 0.125 g L⁻¹ NaNO₃; Nitrogen Depleted (ND): 0.0 g L⁻¹ NaNO₃. To assess the impact of inorganic carbon supplementation, an identical parallel set of these three nitrogen treatments was continuously sparged with 6% CO₂-enriched air at a constant flow rate of 0.5 L min⁻¹ (LPM), designating these treatments as NRc, NLc, and NDc, respectively. All experimental treatments were performed in independent biological triplicates (n = 3). QC sample Treatment: QC3 | Column: Hilic NA Chromochloris zofingiensis NA NA 3 NA

Microalgal biomass equivalent to 1 x 10⁷ cells was harvested from each culture flask via centrifugation. Intracellular metabolites were extracted by adding 1.0 mL of a chilled solvent mixture consisting of methanol, ethanol, and chloroform (1:3:1, v/v/v), supplemented with 3.0 μg/mL of 2-chloro-L-phenylalanine (Cayman Chemical Company) as an internal standard. Cell disruption was achieved by mechanical lysis using glass beads for 15 min, followed by centrifugation at 10,000 rpm, 4°C for 10 min to pellet the cellular debris. The resulting supernatant was collected and evaporated to dryness under vacuum at 4°C using a CentriVap centrifugal concentrator (Labconco). The dried metabolic residue was subsequently reconstituted in 200 μL of a resuspension mixture containing methanol, acetonitrile, and water (5:9:1, v/v/v). Prior to liquid chromatography-mass spectrometry (LC-MS) analysis, the resubmitted extract was clarified by filtration through a 0.2 μm syringe filter (MDI SY123NN).

1

Sr.No MS Exp ID Sample Name/ID Mass Spectrometer Type MS Instrument Name MS Instrument type MS Ionization Method Ion Mode/Scan Polarity Data Transformation (Software/s Used)
1 IME_102583 3ND_1c / IMSM_104218 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
2 IME_102584 3ND_1c_18 / IMSM_104219 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
3 IME_102585 3ND_1_18 / IMSM_104220 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
4 IME_102586 3ND_2 / IMSM_104221 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
5 IME_102587 3ND_2c / IMSM_104222 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
6 IME_102589 3ND_2_18 / IMSM_104224 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
7 IME_102590 3ND_3 / IMSM_104225 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
8 IME_102591 3ND_3c / IMSM_104226 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
9 IME_102592 3ND_3c_18 / IMSM_104227 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
10 IME_102593 3ND_3_18 / IMSM_104228 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
11 IME_102594 3NL_1 / IMSM_104229 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
12 IME_102595 3NL_1c / IMSM_104230 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
13 IME_102596 3NL_1c_18 / IMSM_104231 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
14 IME_102597 3NL_1_18 / IMSM_104232 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
15 IME_102598 3NL_2 / IMSM_104233 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
16 IME_102599 3NL_2c / IMSM_104234 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
17 IME_102600 3NL_2c_18 / IMSM_104235 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
18 IME_102601 3NL_2_18 / IMSM_104236 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
19 IME_102602 3NL_3 / IMSM_104237 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
20 IME_102603 3NL_3c / IMSM_104238 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
21 IME_102604 3NL_3c_18 / IMSM_104239 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
22 IME_102605 3NL_3_18 / IMSM_104240 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
23 IME_102606 3NR_1 / IMSM_104241 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
24 IME_102607 3NR_1c / IMSM_104242 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
25 IME_102608 3NR_1c_18 / IMSM_104243 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
26 IME_102609 3NR_1_18 / IMSM_104244 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
27 IME_102610 3NR_2 / IMSM_104245 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
28 IME_102611 3NR_2c / IMSM_104246 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
29 IME_102612 3NR_2c_18 / IMSM_104247 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
30 IME_102613 3NR_2_18 / IMSM_104248 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
31 IME_102614 3NR_3 / IMSM_104249 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
32 IME_102615 3NR_3c / IMSM_104250 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
33 IME_102616 3NR_3c_18 / IMSM_104251 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
34 IME_102617 3NR_3_18 / IMSM_104252 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
35 IME_102618 6ND_1 / IMSM_104253 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
36 IME_102619 6ND_1c / IMSM_104254 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
37 IME_102620 6ND_1c_18 / IMSM_104255 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
38 IME_102621 6ND_1_18 / IMSM_104256 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
39 IME_102622 6ND_2 / IMSM_104257 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
40 IME_102623 6ND_2c / IMSM_104258 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
41 IME_102624 6ND_2c_18 / IMSM_104259 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
42 IME_102625 6ND_2_18 / IMSM_104260 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
43 IME_102626 6ND_3 / IMSM_104261 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
44 IME_102627 6ND_3c / IMSM_104262 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
45 IME_102628 6ND_3c_18 / IMSM_104263 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
46 IME_102629 6ND_3_18 / IMSM_104264 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
47 IME_102630 6NL_1 / IMSM_104265 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
48 IME_102631 6NL_1c / IMSM_104266 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
49 IME_102632 6NL_1c_18 / IMSM_104267 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
50 IME_102633 6NL_1_18 / IMSM_104268 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
51 IME_102634 6NL_2 / IMSM_104269 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
52 IME_102635 6NL_2c / IMSM_104270 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
53 IME_102636 6NL_2c_18 / IMSM_104271 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
54 IME_102637 6NL_2_18 / IMSM_104272 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
55 IME_102638 6NL_3 / IMSM_104273 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
56 IME_102639 6NL_3c / IMSM_104274 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
57 IME_102640 6NL_3c_18 / IMSM_104275 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
58 IME_102641 6NL_3_18 / IMSM_104276 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
59 IME_102642 6NR_1 / IMSM_104277 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
60 IME_102643 6NR_1c / IMSM_104278 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
61 IME_102644 6NR_1c_18 / IMSM_104279 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
62 IME_102645 6NR_1_18 / IMSM_104280 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
63 IME_102646 6NR_2 / IMSM_104281 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
64 IME_102647 6NR_2c / IMSM_104282 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
65 IME_102648 6NR_2c_18 / IMSM_104283 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
66 IME_102649 6NR_2_18 / IMSM_104284 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
67 IME_102650 6NR_3 / IMSM_104285 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
68 IME_102651 6NR_3c / IMSM_104286 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
69 IME_102652 6NR_3c_18 / IMSM_104287 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
70 IME_102653 6NR_3_18 / IMSM_104288 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
71 IME_102654 9ND_1 / IMSM_104289 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
72 IME_102655 9ND_1c / IMSM_104290 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
73 IME_102656 9ND_1c_18 / IMSM_104291 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
74 IME_102657 9ND_1_18 / IMSM_104292 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
75 IME_102658 9ND_2 / IMSM_104293 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
76 IME_102659 9ND_2c / IMSM_104294 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
77 IME_102660 9ND_2c_18 / IMSM_104295 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
78 IME_102661 9ND_2_18 / IMSM_104296 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
79 IME_102662 9ND_3 / IMSM_104297 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
80 IME_102663 9ND_3c / IMSM_104298 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
81 IME_102664 9ND_3c_18 / IMSM_104299 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
82 IME_102665 9ND_3_18 / IMSM_104300 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
83 IME_102666 9NL_1 / IMSM_104301 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
84 IME_102667 9NL_1c / IMSM_104302 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
85 IME_102668 9NL_1c_18 / IMSM_104303 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
86 IME_102669 9NL_1_18 / IMSM_104304 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
87 IME_102670 9NL_2 / IMSM_104305 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
88 IME_102671 9NL_2c / IMSM_104306 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
89 IME_102672 9NL_2c_18 / IMSM_104307 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
90 IME_102673 9NL_2_18 / IMSM_104308 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
91 IME_102674 9NL_3 / IMSM_104309 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
92 IME_102675 9NL_3c / IMSM_104310 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
93 IME_102676 9NL_3c_18 / IMSM_104311 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
94 IME_102677 9NL_3_18 / IMSM_104312 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
95 IME_102678 9NR_1 / IMSM_104313 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
96 IME_102679 9NR_1c / IMSM_104314 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
97 IME_102680 9NR_1c_18 / IMSM_104315 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
98 IME_102681 9NR_1_18 / IMSM_104316 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
99 IME_102682 9NR_2 / IMSM_104317 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
100 IME_102683 9NR_2c / IMSM_104318 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
101 IME_102684 9NR_2c_18 / IMSM_104319 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
102 IME_102685 9NR_2_18 / IMSM_104320 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
103 IME_102686 9NR_3 / IMSM_104321 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
104 IME_102687 9NR_3c / IMSM_104322 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
105 IME_102688 9NR_3c_18 / IMSM_104323 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
106 IME_102689 9NR_3_18 / IMSM_104324 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
107 IME_102690 BLANK1_18 / IMSM_104325 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
108 IME_102691 BLANK1_H / IMSM_104326 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
109 IME_102692 BLANK2_18 / IMSM_104327 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
110 IME_102693 BLANK2_H / IMSM_104328 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
111 IME_102694 BLANK3_18 / IMSM_104329 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
112 IME_102695 BLANK3_H / IMSM_104330 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
113 IME_102696 QC1_18 / IMSM_104331 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
114 IME_102697 QC1_H / IMSM_104332 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
115 IME_102698 QC2_18 / IMSM_104333 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
116 IME_102699 QC2_H / IMSM_104334 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
117 IME_102700 QC3_18 / IMSM_104335 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA
118 IME_102701 QC3_H / IMSM_104336 LCMS (Liquid Chromatography- Mass Spectrometry) Thermo Fusion Orbitrap Orbitrap Electrospray Ionization - ESI Positive;Negative NA

Sr.No First name Last name Email Organization Designation
1 Pannaga Pavan Jutur jppavan@icgeb.res.in International Centre for Genetic Engineering and Biotechnology principal_investigator

Sr.No ftprun ID MS Exp ID MS Data Files
1 IMR_103187 IME_102583 3ND_1.mzML
2 IMR_103188 IME_102584 3ND_2_18.mzML
3 IMR_103189 IME_102585 3ND_2.mzML
4 IMR_103190 IME_102586 3ND_3_18.mzML
5 IMR_103191 IME_102587 3ND_3.mzML
6 IMR_103193 IME_102589 3ND_1c.mzML
7 IMR_103194 IME_102590 3ND_2c_18.mzML
8 IMR_103195 IME_102591 3ND_2c.mzML
9 IMR_103196 IME_102592 3ND_3c_18.mzML
10 IMR_103197 IME_102593 3ND_3c.mzML
11 IMR_103198 IME_102594 3NL_1_18.mzML
12 IMR_103199 IME_102595 3NL_1.mzML
13 IMR_103200 IME_102596 3NL_2_18.mzML
14 IMR_103201 IME_102597 3NL_2.mzML
15 IMR_103202 IME_102598 3NL_3_18.mzML
16 IMR_103203 IME_102599 3NL_3.mzML
17 IMR_103204 IME_102600 3NL_1c_18.mzML
18 IMR_103205 IME_102601 3NL_1c.mzML
19 IMR_103206 IME_102602 3NL_2c_18.mzML
20 IMR_103207 IME_102603 3NL_2c.mzML
21 IMR_103208 IME_102604 3NL_3c_18.mzML
22 IMR_103209 IME_102605 3NL_3c.mzML
23 IMR_103210 IME_102606 3NR_1_18.mzML
24 IMR_103211 IME_102607 3NR_1.mzML
25 IMR_103212 IME_102608 3NR_2_18.mzML
26 IMR_103213 IME_102609 3NR_2.mzML
27 IMR_103214 IME_102610 3NR_3_18.mzML
28 IMR_103215 IME_102611 3NR_3.mzML
29 IMR_103216 IME_102612 3NR_1c_18.mzML
30 IMR_103217 IME_102613 3NR_1c.mzML
31 IMR_103218 IME_102614 3NR_2c_18.mzML
32 IMR_103219 IME_102615 3NR_2c.mzML
33 IMR_103220 IME_102616 3NR_3c_18.mzML
34 IMR_103221 IME_102617 3NR_3c.mzML
35 IMR_103222 IME_102618 6ND_1_18.mzML
36 IMR_103223 IME_102619 6ND_1.mzML
37 IMR_103224 IME_102620 6ND_2_18.mzML
38 IMR_103225 IME_102621 6ND_2.mzML
39 IMR_103226 IME_102622 6ND_3_18.mzML
40 IMR_103227 IME_102623 6ND_3.mzML
41 IMR_103228 IME_102624 6ND_1c_18.mzML
42 IMR_103229 IME_102625 6ND_1c.mzML
43 IMR_103230 IME_102626 6ND_2c_18.mzML
44 IMR_103231 IME_102627 6ND_2c.mzML
45 IMR_103232 IME_102628 6ND_3c_18.mzML
46 IMR_103233 IME_102629 6ND_3c.mzML
47 IMR_103234 IME_102630 6NL_1_18.mzML
48 IMR_103235 IME_102631 6NL_1.mzML
49 IMR_103236 IME_102632 6NL_2_18.mzML
50 IMR_103237 IME_102633 6NL_2.mzML
51 IMR_103238 IME_102634 6NL_3_18.mzML
52 IMR_103239 IME_102635 6NL_3.mzML
53 IMR_103240 IME_102636 6NL_1c_18.mzML
54 IMR_103241 IME_102637 6NL_1c.mzML
55 IMR_103242 IME_102638 6NL_2c_18.mzML
56 IMR_103243 IME_102639 6NL_2c.mzML
57 IMR_103244 IME_102640 6NL_3c_18.mzML
58 IMR_103245 IME_102641 6NL_3c.mzML
59 IMR_103246 IME_102642 6NR_1_18.mzML
60 IMR_103247 IME_102643 6NR_1.mzML
61 IMR_103248 IME_102644 6NR_2_18.mzML
62 IMR_103249 IME_102645 6NR_2.mzML
63 IMR_103250 IME_102646 6NR_3_18.mzML
64 IMR_103251 IME_102647 6NR_3.mzML
65 IMR_103252 IME_102648 6NR_1c_18.mzML
66 IMR_103253 IME_102649 6NR_1c.mzML
67 IMR_103254 IME_102650 6NR_2c_18.mzML
68 IMR_103255 IME_102651 6NR_2c.mzML
69 IMR_103256 IME_102652 6NR_3c_18.mzML
70 IMR_103257 IME_102653 6NR_3c.mzML
71 IMR_103258 IME_102654 9ND_1_18.mzML
72 IMR_103259 IME_102655 9ND_1.mzML
73 IMR_103260 IME_102656 9ND_2_18.mzML
74 IMR_103261 IME_102657 9ND_2.mzML
75 IMR_103262 IME_102658 9ND_3_18.mzML
76 IMR_103263 IME_102659 9ND_3.mzML
77 IMR_103264 IME_102660 9ND_1c_18.mzML
78 IMR_103265 IME_102661 9ND_1c.mzML
79 IMR_103266 IME_102662 9ND_2c_18.mzML
80 IMR_103267 IME_102663 9ND_2c.mzML
81 IMR_103268 IME_102664 9ND_3c_18.mzML
82 IMR_103269 IME_102665 9ND_3c.mzML
83 IMR_103270 IME_102666 9NL_1_18.mzML
84 IMR_103271 IME_102667 9NL_1.mzML
85 IMR_103272 IME_102668 9NL_2_18.mzML
86 IMR_103273 IME_102669 9NL_2.mzML
87 IMR_103274 IME_102670 9NL_3_18.mzML
88 IMR_103275 IME_102671 9NL_3.mzML
89 IMR_103276 IME_102672 9NL_1c_18.mzML
90 IMR_103277 IME_102673 9NL_1c.mzML
91 IMR_103278 IME_102674 9NL_2c_18.mzML
92 IMR_103279 IME_102675 9NL_2c.mzML
93 IMR_103280 IME_102676 9NL_3c_18.mzML
94 IMR_103281 IME_102677 9NL_3c.mzML
95 IMR_103282 IME_102678 9NR_1_18.mzML
96 IMR_103283 IME_102679 9NR_1.mzML
97 IMR_103284 IME_102680 9NR_2_18.mzML
98 IMR_103285 IME_102681 9NR_2.mzML
99 IMR_103286 IME_102682 9NR_3_18.mzML
100 IMR_103287 IME_102683 9NR_3.mzML
101 IMR_103288 IME_102684 9NR_1c_18.mzML
102 IMR_103289 IME_102685 9NR_1c.mzML
103 IMR_103290 IME_102686 9NR_2c_18.mzML
104 IMR_103291 IME_102687 9NR_2c.mzML
105 IMR_103292 IME_102688 9NR_3c_18.mzML
106 IMR_103293 IME_102689 9NR_3c.mzML
107 IMR_103294 IME_102690 BLANK1_18.mzML
108 IMR_103295 IME_102691 BLANK1_H.mzML
109 IMR_103296 IME_102692 BLANK2_18.mzML
110 IMR_103297 IME_102693 BLANK2_H.mzML
111 IMR_103298 IME_102694 BLANK3_H.mzML
112 IMR_103299 IME_102695 BLANK3_18.mzML
113 IMR_103300 IME_102696 QC1_18.mzML
114 IMR_103301 IME_102697 QC1_H.mzML
115 IMR_103302 IME_102698 QC2_18.mzML
116 IMR_103303 IME_102699 QC2_H.mzML
117 IMR_103304 IME_102700 QC3_18.mzML
118 IMR_103305 IME_102701 QC3_H.mzML